期刊
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
卷 7, 期 1, 页码 166-171出版社
IEEE COMPUTER SOC
DOI: 10.1109/TCBB.2008.66
关键词
Incomplete lineage sorting; coalescent process; topological concordance; statistical consistency
类别
资金
- Sloan Fellowship in Mathematics
- US National Science Foundation (NSF) [DMS 0528488, DMS 0548249]
- ONR [N0014-07-1-05-06]
We introduce a simple computationally efficient algorithm for reconstructing phylogenies from multiple gene trees in the presence of incomplete lineage sorting, that is, when the topology of the gene trees may differ from that of the species tree. We show that our technique is statistically consistent under standard stochastic assumptions, that is, it returns the correct tree given sufficiently many unlinked loci. We also show that it can tolerate moderate estimation errors.
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