4.5 Article

RRBS-Analyser: A Comprehensive Web Server for Reduced Representation Bisulfite Sequencing Data Analysis

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

GBSA: a comprehensive software for analysing whole genome bisulfite sequencing data

Touati Benoukraf et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Biochemical Research Methods

BRAT-BW: efficient and accurate mapping of bisulfite-treated reads

Elena Y. Harris et al.

BIOINFORMATICS (2012)

Review Cell Biology

Next generation sequencing in epigenetics: Insights and challenges

Emma Meaburn et al.

SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2012)

Article Biotechnology & Applied Microbiology

EpiExplorer: live exploration and global analysis of large epigenomic datasets

Konstantin Halachev et al.

GENOME BIOLOGY (2012)

Article Biotechnology & Applied Microbiology

BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions

Kasper D. Hansen et al.

GENOME BIOLOGY (2012)

Article Biotechnology & Applied Microbiology

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles

Altuna Akalin et al.

GENOME BIOLOGY (2012)

Article Biochemical Research Methods

Methyl-Analyzer-whole genome DNA methylation profiling

Yurong Xin et al.

BIOINFORMATICS (2011)

Article Biochemical Research Methods

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

Felix Krueger et al.

BIOINFORMATICS (2011)

Review Genetics & Heredity

Studying the epigenome using next generation sequencing

Chee Seng Ku et al.

JOURNAL OF MEDICAL GENETICS (2011)

Article Biochemistry & Molecular Biology

QDMR: a quantitative method for identification of differentially methylated regions by entropy

Yan Zhang et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemical Research Methods

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan et al.

BIOINFORMATICS (2010)

Article Biochemical Research Methods

BS Seeker: precise mapping for bisulfite sequencing

Pao-Yang Chen et al.

BMC BIOINFORMATICS (2010)

Article Biotechnology & Applied Microbiology

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications

R. Alan Harris et al.

NATURE BIOTECHNOLOGY (2010)

Article Biochemistry & Molecular Biology

The DNA Methylome of Human Peripheral Blood Mononuclear Cells

Yingrui Li et al.

PLOS BIOLOGY (2010)

Article Biochemical Research Methods

Updates to the RMAP short-read mapping software

Andrew D. Smith et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Multidisciplinary Sciences

Human DNA methylomes at base resolution show widespread epigenomic differences

Ryan Lister et al.

NATURE (2009)

Article Biochemistry & Molecular Biology

Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis

A Meissner et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemical Research Methods

Identification and resolution of artifacts in bisulfite sequencing

PM Warnecke et al.

METHODS (2002)

Review Cell Biology

DNA methylation patterns and epigenetic memory

A Bird

GENES & DEVELOPMENT (2002)

Article Biochemistry & Molecular Biology

MethTools - a toolbox to visualize and analyze DNA methylation data

C Grunau et al.

NUCLEIC ACIDS RESEARCH (2000)