Related references
Note: Only part of the references are listed.Verminephrobacter aporrectodeae sp nov subsp tuberculatae and subsp caliginosae, the specific nephridial symbionts of the earthworms Aporrectodea tuberculata and A. caliginosa
Marie B. Lund et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2012)
Attenuation of host NO production by MAMPs potentiates development of the host in the squid-vibrio symbiosis
Melissa A. Altura et al.
CELLULAR MICROBIOLOGY (2011)
Beneficial Effect of Verminephrobacter Nephridial Symbionts on the Fitness of the Earthworm Aporrectodea tuberculata
Marie B. Lund et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Evolutionary microbial genomics: insights into bacterial host adaptation
Christina Toft et al.
NATURE REVIEWS GENETICS (2010)
A complex journey: transmission of microbial symbionts
Monika Bright et al.
NATURE REVIEWS MICROBIOLOGY (2010)
Host-symbiont co-speciation and reductive genome evolution in gut symbiotic bacteria of acanthosomatid stinkbugs
Yoshitomo Kikuchi et al.
BMC BIOLOGY (2009)
Genome wide evolutionary analyses reveal serotype specific patterns of positive selection in selected Salmonella serotypes
Yesim Soyer et al.
BMC EVOLUTIONARY BIOLOGY (2009)
The consequences of genetic drift for bacterial genome complexity
Chih-Horng Kuo et al.
GENOME RESEARCH (2009)
Mutations in ampG and Lytic Transglycosylase Genes Affect the Net Release of Peptidoglycan Monomers from Vibrio fischeri
Dawn M. Adin et al.
JOURNAL OF BACTERIOLOGY (2009)
Trends in Prokaryotic Evolution Revealed by Comparison of Closely Related Bacterial and Archaeal Genomes
Pavel S. Novichkov et al.
JOURNAL OF BACTERIOLOGY (2009)
The Dynamics and Time Scale of Ongoing Genomic Erosion in Symbiotic Bacteria
Nancy A. Moran et al.
SCIENCE (2009)
Genome-Wide Functional Divergence after the Symbiosis of Proteobacteria with Insects Unraveled through a Novel Computational Approach
Christina Toft et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
Genomics and Evolution of Heritable Bacterial Symbionts
Nancy A. Moran et al.
ANNUAL REVIEW OF GENETICS (2008)
Selection on Codon Bias
Ruth Hershberg et al.
ANNUAL REVIEW OF GENETICS (2008)
Reductive genome evolution in chemoautotrophic intracellular symbionts of deep-sea Calyptogena clams
Hirokazu Kuwahara et al.
EXTREMOPHILES (2008)
Verminephrobacter eiseniae gen. nov., sp nov., a nephridial symbiont of the earthworm Eisenia foetida (Savigny)
Nicolas Pinel et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Selective recruitment of bacteria during embryogenesis of an earthworm
Seana K. Davidson et al.
ISME JOURNAL (2008)
Learning how to live together: genomic insights into prokaryote-animal symbioses
Andres Moya et al.
NATURE REVIEWS GENETICS (2008)
Symbiotic diversity in marine animals: the art of harnessing chemosynthesis
Nicole Dubilier et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Characterization of htrB and msbB mutants of the light organ symbiont Vibrio fischeri
Dawn A. Adin et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
PAML 4: Phylogenetic analysis by maximum likelihood
Ziheng Yang
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Identifying bacterial genes and endosymbiont DNA with Glimmer
Arthur L. Delcher et al.
BIOINFORMATICS (2007)
NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
Kim D. Pruitt et al.
NUCLEIC ACIDS RESEARCH (2007)
The evolution of two-component systems in bacteria reveals different strategies for niche adaptation
Eric Alm et al.
PLOS COMPUTATIONAL BIOLOGY (2006)
Symbiosis insights through metagenomic analysis of a microbial consortium
Tanja Woyke et al.
NATURE (2006)
Strict host-symbiont cospeciation and reductive genome evolution in insect gut bacteria
Takahiro Hosokawa et al.
PLOS BIOLOGY (2006)
PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments
Mikita Suyama et al.
NUCLEIC ACIDS RESEARCH (2006)
Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli:: A comparative genomics approach
SL Chen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Transmission of nephridial bacteria of the earthworm Eisenia fetida
SK Davidson et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Breaching the great wall: peptidoglycan and microbial interactions
Karen A. Cloud-Hansen et al.
NATURE REVIEWS MICROBIOLOGY (2006)
Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level
JZ Zhang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2005)
Evidence of positive Darwinian selection in putative meningococcal vaccine antigens
DA Fitzpatrick et al.
JOURNAL OF MOLECULAR EVOLUTION (2005)
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
S Guindon et al.
SYSTEMATIC BIOLOGY (2003)
Acidovorax-like symbionts in the nephridia of earthworms
A Schramm et al.
ENVIRONMENTAL MICROBIOLOGY (2003)
Statistical significance for genomewide studies
JD Storey et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Accounting for background nucleotide composition when measuring codon usage bias
JA Novembre
MOLECULAR BIOLOGY AND EVOLUTION (2002)
CDD: a database of conserved domain alignments with links to domain three-dimensional structure
A Marchler-Bauer et al.
NUCLEIC ACIDS RESEARCH (2002)
InterProScan - an integration platform for the signature-recognition methods in InterPro
EM Zdobnov et al.
BIOINFORMATICS (2001)
The COG database: new developments in phylogenetic classification of proteins from complete genomes
RL Tatusov et al.
NUCLEIC ACIDS RESEARCH (2001)
Share Paper
