Related references
Note: Only part of the references are listed.Macroecology of methane-oxidizing bacteria: the β-diversity of pmoA genotypes in tropical and subtropical rice paddies
Claudia Lueke et al.
ENVIRONMENTAL MICROBIOLOGY (2014)
Different behaviour of methanogenic archaea and Thaumarchaeota in rice field microcosms
Xiubin Ke et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
Anaerobic oxidation of methane in hypersaline cold seep sediments
Lois Maignien et al.
FEMS MICROBIOLOGY ECOLOGY (2013)
The relative contribution of methanotrophs to microbial communities and carbon cycling in soil overlying a coal-bed methane seep
Christopher T. Mills et al.
FEMS MICROBIOLOGY ECOLOGY (2013)
Microbial succession and metabolite changes during fermentation of saeu-jeot: Traditional Korean salted seafood
Ji Young Jung et al.
FOOD MICROBIOLOGY (2013)
Methane emissions from wetlands: biogeochemical, microbial, and modeling perspectives from local to global scales
Scott D. Bridgham et al.
GLOBAL CHANGE BIOLOGY (2013)
Methyl Coenzyme M Reductase A (mcrA) Gene-Based Investigation of Methanogens in the Mudflat Sediments of Yangtze River Estuary, China
Jemaneh Zeleke et al.
MICROBIAL ECOLOGY (2013)
Methyl Fluoride Affects Methanogenesis Rather than Community Composition of Methanogenic Archaea in a Rice Field Soil
Anne Daebeler et al.
PLOS ONE (2013)
Changes in community structure of methanogenic archaea brought about by water-saving practice in paddy field soil
Takeshi Watanabe et al.
SOIL BIOLOGY & BIOCHEMISTRY (2013)
Conceptualizing functional traits and ecological characteristics of methane-oxidizing bacteria as life strategies
Adrian Ho et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2013)
Effect of seedling transplanting date on methane emission from rice paddy soil during cultivation
Sang Yoon Kim et al.
SOIL SCIENCE AND PLANT NUTRITION (2013)
Responses of Methanogen mcrA Genes and Their Transcripts to an Alternate Dry/Wet Cycle of Paddy Field Soil
Ke Ma et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Comparative Survey of Rumen Microbial Communities and Metabolites across One Caprine and Three Bovine Groups, Using Bar-Coded Pyrosequencing and 1H Nuclear Magnetic Resonance Spectroscopy
Hyo Jung Lee et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Community structure of methanogenic archaea and methane production associated with compost-treated tropical rice-field soil
Alpana Singh et al.
FEMS MICROBIOLOGY ECOLOGY (2012)
One millimetre makes the difference: high-resolution analysis of methane-oxidizing bacteria and their specific activity at the oxic-anoxic interface in a flooded paddy soil
Andreas Reim et al.
ISME JOURNAL (2012)
Characterization of the Bacterial and Archaeal Communities in Rice Field Soils Subjected to Long-Term Fertilization Practices
Jae-Hyung Ahn et al.
JOURNAL OF MICROBIOLOGY (2012)
pH controls over anaerobic carbon mineralization, the efficiency of methane production, and methanogenic pathways in peatlands across an ombrotrophic-minerotrophic gradient
Rongzhong Ye et al.
SOIL BIOLOGY & BIOCHEMISTRY (2012)
Methane source strength and energy flow shape methanotrophic communities in oxygen-methane counter-gradients
Sascha Krause et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2012)
Potential of pmoA Amplicon Pyrosequencing for Methanotroph Diversity Studies
Claudia Lueke et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Metagenomic Analysis of Kimchi, a Traditional Korean Fermented Food
Ji Young Jung et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Methanoregula boonei gen. nov., sp. nov., an acidiphilic methanogen isolated from an acidic peat bog
Suzanna L. Braeuer et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Reproducibility and quantitation of amplicon sequencing-based detection
Jizhong Zhou et al.
ISME JOURNAL (2011)
Gentisate 1,2-dioxygenase, in the third naphthalene catabolic gene cluster of Polaromonas naphthalenivorans CJ2, has a role in naphthalene degradation
Hyo Jung Lee et al.
MICROBIOLOGY-SGM (2011)
Ageing well: methane oxidation and methane oxidizing bacteria along a chronosequence of 2000 years
Adrian Ho et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2011)
Methanotrophic bacteria associated to rice roots: the cultivar effect assessed by T-RFLP and microarray analysis
Claudia Lueke et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2011)
Effect of Chinese milk vetch (Astragalus sinicus L.) as a green manure on rice productivity and methane emission in paddy soil
Chang Hoon Lee et al.
AGRICULTURE ECOSYSTEMS & ENVIRONMENT (2010)
Biogeography of wetland rice methanotrophs
Claudia Lueke et al.
ENVIRONMENTAL MICROBIOLOGY (2010)
Succession of methanotrophs in oxygen-methane counter-gradients of flooded rice paddies
Sascha Krause et al.
ISME JOURNAL (2010)
Effect of nitrogen fertilization on methane oxidation, abundance, community structure, and gene expression of methanotrophs in the rice rhizosphere
Minita Shrestha et al.
ISME JOURNAL (2010)
PANGEA: pipeline for analysis of next generation amplicons
Adriana Giongo et al.
ISME JOURNAL (2010)
Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
Katharina F. Ettwig et al.
NATURE (2010)
Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota
Anja Spang et al.
TRENDS IN MICROBIOLOGY (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Functional and structural response of the methanogenic microbial community in rice field soil to temperature change
Ralf Conrad et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Composition of Archaeal Community in a Paddy Field as Affected by Rice Cultivar and N Fertilizer
Liqin Wu et al.
MICROBIAL ECOLOGY (2009)
Antioxidant systems of moderately thermophilic methanotrophs Methylocaldum szegediense and Methylococcus capsulatus
K. A. Medvedkova et al.
MICROBIOLOGY (2009)
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
J. R. Cole et al.
NUCLEIC ACIDS RESEARCH (2009)
Archaea in dry soil environments
Sari Timonen et al.
PHYTOCHEMISTRY REVIEWS (2009)
Methanosaeta sp., the major archaeal endosymbiont of Metopus es
Nimi Narayanan et al.
RESEARCH IN MICROBIOLOGY (2009)
Manganese- and Iron-Dependent Marine Methane Oxidation
Emily J. Beal et al.
SCIENCE (2009)
Effect of industrial by-products containing electron acceptors on mitigating methane emission during rice cultivation
Muhammad Aslam Ali et al.
WASTE MANAGEMENT (2009)
Responses of methanogenic archaeal community to oxygen exposure in rice field soil
Yanli Yuan et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2009)
Phylogenetic Comparison of the Methanogenic Communities from an Acidic, Oligotrophic Fen and an Anaerobic Digester Treating Municipal Wastewater Sludge
Lisa M. Steinberg et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Dynamics of the methanogenic archaeal community during plant residue decomposition in an anoxic rice field soil
Jingjing Peng et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Soil type links microbial colonization of rice roots to methane emission
Ralf Conrad et al.
GLOBAL CHANGE BIOLOGY (2008)
Effect of silicate fertilizer on reducing methane emission during rice cultivation
Muhammad Aslam Ali et al.
BIOLOGY AND FERTILITY OF SOILS (2008)
SILVA:: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
Elmar Pruesse et al.
NUCLEIC ACIDS RESEARCH (2007)
Effect of temperature on composition of the methanotrophic community in rice field and forest soil
Santosh R. Mohanty et al.
FEMS MICROBIOLOGY ECOLOGY (2007)
Microbial diversity in the deep sea and the underexplored rare biosphere
Mitchell L. Sogin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Isolation of a novel acidiphilic methanogen from an acidic peat bog
Suzanna L. Braeuer et al.
NATURE (2006)
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
Weizhong Li et al.
BIOINFORMATICS (2006)
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
T. Z. DeSantis et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes
T. Z. DeSantis et al.
NUCLEIC ACIDS RESEARCH (2006)
Methyl-coenzyme M reductase and the anaerobic oxidation of methane in methanotrophic Archaea
S Shima et al.
CURRENT OPINION IN MICROBIOLOGY (2005)
UniFrac: a new phylogenetic method for comparing microbial communities
C Lozupone et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
In situ stable isotope probing of methanogenic archaea in the rice rhizosphere
YH Lu et al.
SCIENCE (2005)
Comparison of Enterococcus measurements in freshwater at two recreational beaches by quantitative polymerase chain reaction and membrane filter culture analysis
RA Haugland et al.
WATER RESEARCH (2005)
Archaeal phylotypes in a metal-rich and low-activity deep subsurface sediment of the Peru Basin, ODP Leg 201, Site 1231
K. B. Sorensen et al.
GEOBIOLOGY (2004)
Archaeal community structure and pathway of methane formation on rice roots
KJ Chin et al.
MICROBIAL ECOLOGY (2004)
Quantitative detection of methanotrophs in soil by novel pmoA-targeted real-time PCR assays
S Kolb et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2003)
The mcrA gene as an alternative to 16S rRNA in the phylogenetic analysis of methanogen populations in landfill
PE Luton et al.
MICROBIOLOGY-SGM (2002)
Control of microbial methane production in wetland rice fields
R Conrad
NUTRIENT CYCLING IN AGROECOSYSTEMS (2002)
Detection of methanotroph diversity on roots of submerged rice plants by molecular retrieval of pmoA, mmoX, mxaF, and 16S rRNA and ribosomal DNA, including pmoA-based terminal restriction fragment length polymorphism profiling
HP Horz et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2001)
Methane-consuming archaea revealed by directly coupled isotopic and phylogenetic analysis
VJ Orphan et al.
SCIENCE (2001)
Changes in activity and community structure of methane-oxidizing bacteria over the growth period of rice
G Eller et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2001)
Microbial processes influencing methane emission from rice fields
M Kruger et al.
GLOBAL CHANGE BIOLOGY (2001)
Microbiology of flooded rice paddies
W Liesack et al.
FEMS MICROBIOLOGY REVIEWS (2000)
Effects of O2 and CH4 on presence and activity of the indigenous methanotrophic community in rice field soil
T Henckel et al.
ENVIRONMENTAL MICROBIOLOGY (2000)
Dynamics of dissolved organic carbon and methane emissions in a flooded rice soil
YH Lu et al.
SOIL SCIENCE SOCIETY OF AMERICA JOURNAL (2000)
Effect of temperature on carbon and electron flow and on the archaeal community in methanogenic rice field soil
A Fey et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)