4.2 Review

Methods for analyzing and quantifying protein-protein interaction

Related references

Note: Only part of the references are listed.
Review Biotechnology & Applied Microbiology

Cell-free protein synthesis: the state of the art

James W. Whittaker

BIOTECHNOLOGY LETTERS (2013)

Article Biochemistry & Molecular Biology

X-ray crystallography and NMR studies of domain-swapped canecystatin-1

Napoleao F. Valadares et al.

FEBS JOURNAL (2013)

Article Chemistry, Analytical

Application of Bio-Layer Interferometry for the analysis of protein/liposome interactions

Jakob Wallner et al.

JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS (2013)

Article Biochemical Research Methods

Improved Detection of Quantitative Differences Using a Combination of Spectral Counting and MS/MS Total Ion Current

Dana M. Freund et al.

JOURNAL OF PROTEOME RESEARCH (2013)

Article Biochemical Research Methods

Native Protein Complexes in the Cytoplasm of Red Blood Cells

Valeria Pallotta et al.

JOURNAL OF PROTEOME RESEARCH (2013)

Article Biochemistry & Molecular Biology

Mapping the functional yeast ABC transporter interactome

Jamie Snider et al.

NATURE CHEMICAL BIOLOGY (2013)

Article Biochemical Research Methods

Microscale thermophoresis quantifies biomolecular interactions under previously challenging conditions

Susanne A. I. Seidel et al.

METHODS (2013)

Review Biochemical Research Methods

Affinity-based microarrays for proteomic analysis of cancer tissues

Joerg D. Hoheisel et al.

PROTEOMICS CLINICAL APPLICATIONS (2013)

Article Biochemistry & Molecular Biology

FRET microscopy in the living cell: Different approaches, strengths and weaknesses

Sergi Padilla-Parra et al.

BIOESSAYS (2012)

Article Biochemical Research Methods

Bimolecular fluorescence complementation (BiFC): A 5-year update and future perspectives

Yutaka Kodama et al.

BIOTECHNIQUES (2012)

Article Biotechnology & Applied Microbiology

Chip-based protein-protein interaction studied by atomic force microscopy

Feng-Sheng Kao et al.

BIOTECHNOLOGY AND BIOENGINEERING (2012)

Review Biochemistry & Molecular Biology

Applications of isothermal titration calorimetry in pure and applied researchusurvey of the literature from 2010

Rajesh Ghai et al.

JOURNAL OF MOLECULAR RECOGNITION (2012)

Article Biochemical Research Methods

Extending the Dynamic Range of Label-free Mass Spectrometric Quantification of Affinity Purifications

Wolfgang Bildl et al.

MOLECULAR & CELLULAR PROTEOMICS (2012)

Article Biochemical Research Methods

Parallel Reaction Monitoring for High Resolution and High Mass Accuracy Quantitative, Targeted Proteomics

Amelia C. Peterson et al.

MOLECULAR & CELLULAR PROTEOMICS (2012)

Review Biochemical Research Methods

Selected reaction monitoring-based proteomics: workflows, potential, pitfalls and future directions

Paola Picotti et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

A comparison and optimization of yeast two-hybrid systems

J. H. Caufield et al.

METHODS (2012)

Article Multidisciplinary Sciences

How Many Protein-Protein Interactions Types Exist in Nature?

Leonardo Garma et al.

PLOS ONE (2012)

Review Biochemical Research Methods

Molecular Interaction Studies Using Microscale Thermophoresis

Moran Jerabek-Willemsen et al.

ASSAY AND DRUG DEVELOPMENT TECHNOLOGIES (2011)

Review Biochemical Research Methods

Recent advances in charting protein-protein interaction: mass spectrometry-based approaches

Anne-Claude Gavin et al.

CURRENT OPINION IN BIOTECHNOLOGY (2011)

Review Biochemistry & Molecular Biology

Visualizing protein partnerships in living cells and organisms

Melissa A. Lowder et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2011)

Review Biochemistry & Molecular Biology

Split-protein systems: beyond binary protein-protein interactions

Sujan S. Shekhawat et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2011)

Article Biochemistry & Molecular Biology

Biosensor-based small molecule fragment screening with biolayer interferometry

Charles A. Wartchow et al.

JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN (2011)

Article Biochemical Research Methods

Single-Molecule Detection on a Protein-Array Assay Platform for the Exposure of a Tuberculosis Antigen

Ronny Schmidt et al.

JOURNAL OF PROTEOME RESEARCH (2011)

Article Biochemical Research Methods

Quantification of Protein-Protein Interactions with Chemical Cross-Linking and Mass Spectrometry

Juan D. Chavez et al.

JOURNAL OF PROTEOME RESEARCH (2011)

Article Chemistry, Multidisciplinary

A Homogeneous Fluorescence Resonance Energy Transfer System for Monitoring the Activation of a Protein Switch in Real Time

Anke Bill et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)

Article Biochemical Research Methods

Label-Free Proteomic Identification of Endogenous, Insulin-Stimulated Interaction Partners of Insulin Receptor Substrate-1

Thangiah Geetha et al.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2011)

Article Nanoscience & Nanotechnology

Quantification of protein interactions and solution transport using high-density GMR sensor arrays

Richard S. Gaster et al.

NATURE NANOTECHNOLOGY (2011)

Review Genetics & Heredity

Synonymous but not the same: the causes and consequences of codon bias

Joshua B. Plotkin et al.

NATURE REVIEWS GENETICS (2011)

Review Chemistry, Multidisciplinary

Protein Microarrays: Novel Developments and Applications

Luis Berrade et al.

PHARMACEUTICAL RESEARCH (2011)

Article Evolutionary Biology

Connections between Alternative Transcription and Alternative Splicing in Mammals

Svetlana A. Shabalina et al.

GENOME BIOLOGY AND EVOLUTION (2010)

Review Biochemistry & Molecular Biology

A new cross-linking strategy: protein interaction reporter (PIR) technology for protein-protein interaction studies

Xiaoting Tang et al.

MOLECULAR BIOSYSTEMS (2010)

Article Biochemical Research Methods

A human MAP kinase interactome

Sourav Bandyopadhyay et al.

NATURE METHODS (2010)

Article Biochemical Research Methods

Quantifying protein-protein interactions in high throughput using protein domain microarrays

Alexis Kaushansky et al.

NATURE PROTOCOLS (2010)

Review Biochemical Research Methods

Label-free detection techniques for protein microarrays: Prospects, merits and challenges

Sandipan Ray et al.

PROTEOMICS (2010)

Article Multidisciplinary Sciences

Protein-binding assays in biological liquids using microscale thermophoresis

Christoph J. Wienken et al.

NATURE COMMUNICATIONS (2010)

Article Biotechnology & Applied Microbiology

A human functional protein interaction network and its application to cancer data analysis

Guanming Wu et al.

GENOME BIOLOGY (2010)

Article Engineering, Biomedical

Proteomics by Mass Spectrometry: Approaches, Advances, and Applications

John R. Yates et al.

Annual Review of Biomedical Engineering (2009)

Review Biochemistry & Molecular Biology

Yeast Two-Hybrid, a Powerful Tool for Systems Biology

Anna Brueckner et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2009)

Article Biochemical Research Methods

An empirical framework for binary interactome mapping

Kavitha Venkatesan et al.

NATURE METHODS (2009)

Article Biochemistry & Molecular Biology

Domain stabilities in protein kinase R (PKR): Evidence for weak interdomain interactions

Eric Anderson et al.

BIOCHEMISTRY (2008)

Article Mathematical & Computational Biology

Construction of a cancer-perturbed protein-protein interaction network for discovery of apoptosis drug targets

Liang-Hui Chu et al.

BMC SYSTEMS BIOLOGY (2008)

Article Biochemical Research Methods

Next-generation high-density self-assembling functional protein arrays

Niroshan Ramachandran et al.

NATURE METHODS (2008)

Article Biochemical Research Methods

Printing protein arrays from DNA arrays

Mingyue He et al.

NATURE METHODS (2008)

Article Biochemical Research Methods

Quantitative proteomics using stable isotope labeling with amino acids in cell culture

H. C. Harsha et al.

NATURE PROTOCOLS (2008)

Editorial Material Multidisciplinary Sciences

How do proteins interact?

David D. Boehr et al.

SCIENCE (2008)

Article Multidisciplinary Sciences

Distinguishing protein-coding and noncoding genes in the human genome

Michele Clamp et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Multidisciplinary Sciences

Free-solution, label-free molecular interactions studied by back-scattering interferometry

Darryl J. Bornhop et al.

SCIENCE (2007)

Review Cell Biology

Analysis of protein complexes using mass spectrometry

Anne-Claude Gingras et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)

Article Biochemical Research Methods

Protein labeling by iTRAQ: A new tool for quantitative mass spectrometry in proteome research

Sebastian Wiese et al.

PROTEOMICS (2007)

Review Biochemistry & Molecular Biology

The molecular architecture of protein-protein binding sites

Dana Reichmann et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2007)

Article Biotechnology & Applied Microbiology

eComputational prediction of proteotypic peptides for quantitative proteomics

Parag Mallick et al.

NATURE BIOTECHNOLOGY (2007)

Article Biochemical Research Methods

Direct observation of individual endogenous protein complexes in situ by proximity ligation

Ola Soderberg et al.

NATURE METHODS (2006)

Article Biochemical Research Methods

Protein interaction screening by quantitative immunoprecipitation combined with knockdown (QUICK)

Matthias Selbach et al.

NATURE METHODS (2006)

Article Biochemical Research Methods

Generation of high density protein microarrays by cell-free in situ expression of unpurified PCR products

Philipp Angenendt et al.

MOLECULAR & CELLULAR PROTEOMICS (2006)

Review Biochemistry & Molecular Biology

Cell-free translation systems for protein engineering

Yoshihiro Shimizu et al.

FEBS JOURNAL (2006)

Article Multidisciplinary Sciences

Towards a proteome-scale map of the human protein-protein interaction network

JF Rual et al.

NATURE (2005)

Review Biochemistry & Molecular Biology

How to study proteins by circular dichroism

SM Kelly et al.

BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2005)

Review Biochemistry & Molecular Biology

Thermodynamics of protein-ligand interactions: History, presence, and future aspects

R Perozzo et al.

JOURNAL OF RECEPTORS AND SIGNAL TRANSDUCTION (2004)

Review Biochemistry & Molecular Biology

Diversity of protein-protein interactions

IMA Nooren et al.

EMBO JOURNAL (2003)

Review Biochemical Research Methods

Microarrays to characterize protein interactions on a whole-proteome scale

B Schweitzer et al.

PROTEOMICS (2003)

Article Biochemical Research Methods

Protein interactions - Two methods for assessment of the reliability of high throughput observations

CM Deane et al.

MOLECULAR & CELLULAR PROTEOMICS (2002)

Article Biochemistry & Molecular Biology

Mapping protein-protein interactions in solution by NMR Spectroscopy

ERP Zuiderweg

BIOCHEMISTRY (2002)