Journal
EUKARYOTIC CELL
Volume 11, Issue 11, Pages 1413-1414Publisher
AMER SOC MICROBIOLOGY
DOI: 10.1128/EC.00164-12
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- Wageningen University
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We report here an update of the Botrytis cinerea strains B05.10 and T4 genomes, as well as an automated preliminary gene structure annotation. High-coverage de novo assemblies and reference-based alignments led to a correction of wrong base calls, elimination of sequence gaps, and improved joining of contigs. The new assemblies have substantially lower numbers of scaffolds and a concomitant increase in the N-50. The list of protein-coding genes was generated using the evidence-driven gene predictor Augustus, with expressed sequence tag evidence and RNA-Seq data as input.
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