Related references
Note: Only part of the references are listed.Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
Brian J. Haas et al.
GENOME RESEARCH (2011)
Hydrogen-isotopic variability in fatty acids from Yellowstone National Park hot spring microbial communities
Magdalena R. Osburn et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2011)
GenBank
Dennis A. Benson et al.
NUCLEIC ACIDS RESEARCH (2011)
Novel Microbial Diversity Retrieved by Autonomous Robotic Exploration of the World's Deepest Vertical Phreatic Sinkhole
Jason W. Sahl et al.
ASTROBIOLOGY (2010)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Frederick A. Matsen et al.
BMC BIOINFORMATICS (2010)
How Many Bootstrap Replicates Are Necessary?
Nicholas D. Pattengale et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2010)
Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions
Jens Reeder et al.
NATURE METHODS (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
Bacterial diversity in dry modern freshwater stromatolites from Ruidera Pools Natural Park, Spain
Fernando Santos et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2010)
Ecological Specialization in a Spatially Structured Population of the Thermophilic Cyanobacterium Mastigocladus laminosus
Scott R. Miller et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Bar-Coded Pyrosequencing Reveals Shared Bacterial Community Properties along the Temperature Gradients of Two Alkaline Hot Springs in Yellowstone National Park
Scott R. Miller et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Infernal 1.0: inference of RNA alignments
Eric P. Nawrocki et al.
BIOINFORMATICS (2009)
Microbial diversity in modern marine stromatolites, Highborne Cay, Bahamas
Laura K. Baumgartner et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Determining the specific microbial populations and their spatial distribution within the stromatolite ecosystem of Shark Bay
Falicia Goh et al.
ISME JOURNAL (2009)
Molecular and morphological characterization of cyanobacterial diversity in the stromatolites of Highborne Cay, Bahamas
Jamie S. Foster et al.
ISME JOURNAL (2009)
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
J. R. Cole et al.
NUCLEIC ACIDS RESEARCH (2009)
Comparative Characterization of the Microbial Diversities of an Artificial Microbialite Model and a Natural Stromatolite
Stephanie A. Havemann et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Characterization of true-branching cyanobacteria from geothermal sites and hot springs of Costa Rica
Karin Finsinger et al.
ENVIRONMENTAL MICROBIOLOGY (2008)
Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
Micah Hamady et al.
NATURE METHODS (2008)
Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers
Zongzhi Liu et al.
NUCLEIC ACIDS RESEARCH (2008)
Microbial processes forming daily lamination in a stromatolitic travertine
Chizuru Takashima et al.
SEDIMENTARY GEOLOGY (2008)
A Rapid Bootstrap Algorithm for the RAxML Web Servers
Alexandros Stamatakis et al.
SYSTEMATIC BIOLOGY (2008)
SILVA:: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
Elmar Pruesse et al.
NUCLEIC ACIDS RESEARCH (2007)
Short pyrosequencing reads suffice for accurate microbial community analysis
Zongzhi Liu et al.
NUCLEIC ACIDS RESEARCH (2007)
Global patterns in bacterial diversity
Catherine A. Lozupone et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
PyCogent: a toolkit for making sense from sequence
Rob Knight et al.
GENOME BIOLOGY (2007)
Accuracy and quality of massively parallel DNA pyrosequencing
Susan M. Huse et al.
GENOME BIOLOGY (2007)
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis
BIOINFORMATICS (2006)
Microbial diversity in the deep sea and the underexplored rare biosphere
Mitchell L. Sogin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative
Maria Anisimova et al.
SYSTEMATIC BIOLOGY (2006)
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
T. Z. DeSantis et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Stromatolite reef from the Early Archaean era of Australia
Abigail C. Allwood et al.
NATURE (2006)
The evolutionary diversification of cyanobacteria: Molecular-phylogenetic and paleontological perspectives
A Tomitani et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Molecular population genetics and phenotypic diversification of two populations of the thermophilic cyanobacterium Mastigocladus laminosus
SR Miller et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Growth morphologies of modem marine stromatolites: A case study from Highborne Cay, Bahamas
MS Andres et al.
SEDIMENTARY GEOLOGY (2006)
Predicting microbial species richness
SH Hong et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Effects of phosphorus enrichment and grazing snails on modern stromatolitic microbial communities
JJ Elser et al.
FRESHWATER BIOLOGY (2005)
Composition and structure of microbial communities from stromatolites of Hamelin Pool in Shark Bay, Western Australia
D Papineau et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Hydrogen and bioenergetics in the Yellowstone geothermal ecosystem
JR Spear et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
JR Cole et al.
NUCLEIC ACIDS RESEARCH (2005)
Variation in sulfide tolerance of photosystem II in phylogenetically diverse cyanobacteria from sulfidic habitats
SR Miller et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Microbial diversity of extant stromatolites in the hypersaline marine environment of Shark Bay, Australia
BP Burns et al.
ENVIRONMENTAL MICROBIOLOGY (2004)
Bacterially mediated precipitation in marine stromatolites
HW Paerl et al.
ENVIRONMENTAL MICROBIOLOGY (2001)
The role of microbes in accretion, lamination and early lithification of modern marine stromatolites
RP Reid et al.
NATURE (2000)
Share Paper
