Related references
Note: Only part of the references are listed.The Carnivorous Pale Pitcher Plant Harbors Diverse, Distinct, and Time-Dependent Bacterial Communities
Margaret M. Koopman et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
Victor Kunin et al.
ENVIRONMENTAL MICROBIOLOGY (2010)
Bacterial communities of disease vectors sampled across time, space, and species
Ryan T. Jones et al.
ISME JOURNAL (2010)
How Many Bootstrap Replicates Are Necessary?
Nicholas D. Pattengale et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2010)
Archaea and bacteria with surprising microdiversity show shifts in dominance over 1,000-year time scales in hydrothermal chimneys
William J. Brazelton et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins
Peter J. Turnbaugh et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
The Effects of Alignment Quality, Distance Calculation Method, Sequence Filtering, and Region on the Analysis of 16S rRNA Gene-Based Studies
Patrick D. Schloss
PLOS COMPUTATIONAL BIOLOGY (2010)
Comparison of Species Richness Estimates Obtained Using Nearly Complete Fragments and Simulated Pyrosequencing-Generated Fragments in 16S rRNA Gene-Based Environmental Surveys
Noha Youssef et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Jalview Version 2-a multiple sequence alignment editor and analysis workbench
Andrew M. Waterhouse et al.
BIOINFORMATICS (2009)
Systematic artifacts in metagenomes from complex microbial communities
Vicente Gomez-Alvarez et al.
ISME JOURNAL (2009)
A core gut microbiome in obese and lean twins
Peter J. Turnbaugh et al.
NATURE (2009)
Metatranscriptomics reveals unique microbial small RNAs in the ocean's water column
Yanmei Shi et al.
NATURE (2009)
Accurate determination of microbial diversity from 454 pyrosequencing data
Christopher Quince et al.
NATURE METHODS (2009)
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
J. R. Cole et al.
NUCLEIC ACIDS RESEARCH (2009)
Bacterial Community Variation in Human Body Habitats Across Space and Time
Elizabeth K. Costello et al.
SCIENCE (2009)
Novelty and uniqueness patterns of rare members of the soil biosphere
Mostafa S. Elshahed et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers
Zongzhi Liu et al.
NUCLEIC ACIDS RESEARCH (2008)
The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis
Philip McKenna et al.
PLOS PATHOGENS (2008)
Microbial community gene expression in ocean surface waters
Jorge. Frias-Lopez et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
A Rapid Bootstrap Algorithm for the RAxML Web Servers
Alexandros Stamatakis et al.
SYSTEMATIC BIOLOGY (2008)
Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing
Susan M. Huse et al.
PLOS GENETICS (2008)
Short pyrosequencing reads suffice for accurate microbial community analysis
Zongzhi Liu et al.
NUCLEIC ACIDS RESEARCH (2007)
An obesity-associated gut microbiome with increased capacity for energy harvest
Peter J. Turnbaugh et al.
NATURE (2006)
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis
BIOINFORMATICS (2006)
Microbial diversity in the deep sea and the underexplored rare biosphere
Mitchell L. Sogin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context
Catherine Lozupone et al.
BMC BIOINFORMATICS (2006)
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
T. Z. DeSantis et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes
T. Z. DeSantis et al.
NUCLEIC ACIDS RESEARCH (2006)
Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea
NU Frigaard et al.
NATURE (2006)
Community genomics among stratified microbial assemblages in the ocean's interior
EF DeLong et al.
SCIENCE (2006)
Detection of lateral gene transfer events in the prokaryotic tRNA synthetases by the ratios of evolutionary distances method
K Farahi et al.
JOURNAL OF MOLECULAR EVOLUTION (2004)
Share Paper
