4.5 Article

AMBER-ii: New Combining Rules and Force Field for Perfluoroalkanes

Journal

JOURNAL OF PHYSICAL CHEMISTRY B
Volume 119, Issue 46, Pages 14563-14573

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/acs.jpcb.5b07233

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Funding

  1. Program of the Presidium of the Russian Academy of Sciences for Molecular and Cellular Biology
  2. Russian Foundation for Basic Research [14-04-01269]
  3. Swedish Research Council (Vetenskapsradet)

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A molecular mechanics force field of the AMBER/OPLS family for perfluoroalkanes, noble gases, and their Mixtures with alkanes has been proposed. We had to abandon the traditional Lorentz Berthelot combining rules for the Lennard-Jones potential to be able to uniformly describe these substance classes and their mixtures. Instead, the Waldman-Hagler rules developed for noble gases were used for all of these elements except hydrogen. Hydrogen is considered to be a particular substance to which the usual Lorentz Berthelot rules are applied. The proposed rules have little effect on the organic chemistry of H, C, N, and O elements but make it compliant with the chemistry of heavy elements. Because of assigning a relatively high partial charge of -0.37e to fluorine atoms, the new force field reproduces the mutual insolubility of higher liquid alkanes and perfluoroalkanes.

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