4.6 Review

Using Feature Selection Technique for Drug-Target Interaction Networks Prediction

Journal

CURRENT MEDICINAL CHEMISTRY
Volume 18, Issue 36, Pages 5687-5693

Publisher

BENTHAM SCIENCE PUBL LTD
DOI: 10.2174/092986711798347270

Keywords

Drug-target interaction; feature selection method; improved bipartite learning graph method

Funding

  1. National Natural Science Foundation of China [30900840]
  2. Fundamental Research Funds for the Central Universities

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Elucidating the interaction relationship between target proteins and all drugs is critical for the discovery of new drug targets. However, it is a big challenge to integrate and optimize different feature information into one single knowledge view for drug-target interaction prediction. In this article, a feature selection method was proposed to rank the original feature sets. Then, an improved bipartite learning graph method was used to predict four types of drug-target datasets based on the optimized feature subsets. The cross-validation results demonstrate that the proposed method can provide superior performance than previous method on four classes of drug target families.

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