4.4 Review

The impact of next-generation sequencing technologies on HLA research

Related references

Note: Only part of the references are listed.
Article Biotechnology & Applied Microbiology

HLA-VBSeq: accurate HLA typing at full resolution from whole-genome sequencing data

Naoki Nariai et al.

BMC GENOMICS (2015)

Article Biochemistry & Molecular Biology

Development of a high-resolution NGS-based HLA-typing and analysis pipeline

Michael Wittig et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Genetics & Heredity

HLAreporter: a tool for HLA typing from next generation sequencing data

Yazhi Huang et al.

GENOME MEDICINE (2015)

Article Biochemical Research Methods

OptiType: precision HLA typing from next-generation sequencing data

Andras Szolek et al.

BIOINFORMATICS (2014)

Article Biotechnology & Applied Microbiology

Genomic selection accuracies within and between environments and small breeding groups in white spruce

Jean Beaulieu et al.

BMC GENOMICS (2014)

Article Biotechnology & Applied Microbiology

High-throughput multiplex HLA genotyping by next-generation sequencing using multi-locus individual tagging

Philip K. Ehrenberg et al.

BMC GENOMICS (2014)

Article Biotechnology & Applied Microbiology

Phase-defined complete sequencing of the HLA genes by next-generation sequencing

Kazuyoshi Hosomichi et al.

BMC GENOMICS (2013)

News Item Biochemistry & Molecular Biology

Momentum grows to make 'personalized' medicine more 'precise'

Alla Katsnelson

NATURE MEDICINE (2013)

Article Biochemistry & Molecular Biology

ATHLATES: accurate typing of human leukocyte antigen through exome sequencing

Chang Liu et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Multidisciplinary Sciences

Clustering and Alignment of Polymorphic Sequences for HLA-DRB1 Genotyping

Steven Ringquist et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

HLA Haplotyping from RNA-seq Data Using Hierarchical Read Weighting

Hyunsung John Kim et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

HLA Typing from 1000 Genomes Whole Genome and Whole Exome Illumina Data

Endre Major et al.

PLOS ONE (2013)

Article Biotechnology & Applied Microbiology

Ultra-high resolution HLA genotyping and allele discovery by highly multiplexed cDNA amplicon pyrosequencing

Simon M. Lank et al.

BMC GENOMICS (2012)

Article Biochemistry & Molecular Biology

Annotation of functional variation in personal genomes using RegulomeDB

Alan P. Boyle et al.

GENOME RESEARCH (2012)

Review Genetics & Heredity

Next-generation sequencing: impact of exome sequencing in characterizing Mendelian disorders

Bahareh Rabbani et al.

JOURNAL OF HUMAN GENETICS (2012)

Article Multidisciplinary Sciences

An integrated map of genetic variation from 1,092 human genomes

David M. Altshuler et al.

NATURE (2012)

Article Multidisciplinary Sciences

High-throughput, high-fidelity HLA genotyping with deep sequencing

Chunlin Wang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

News Item Multidisciplinary Sciences

GENOMICS ENCODE Project Writes Eulogy For Junk DNA

Elizabeth Pennisi

SCIENCE (2012)

Article Genetics & Heredity

HLA typing from RNA-Seq sequence reads

Sebastian Boegel et al.

GENOME MEDICINE (2012)

Article Genetics & Heredity

Derivation of HLA types from shotgun sequence datasets

Rene L. Warren et al.

GENOME MEDICINE (2012)

Article Biotechnology & Applied Microbiology

Next-generation sequencing for HLA typing of class I loci

Rachel L. Erlich et al.

BMC GENOMICS (2011)

Review Genetics & Heredity

The HLA genomic loci map: expression, interaction, diversity and disease

Takashi Shiina et al.

JOURNAL OF HUMAN GENETICS (2009)

Article Biotechnology & Applied Microbiology

Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing

Andreas Gnirke et al.

NATURE BIOTECHNOLOGY (2009)

Article Multidisciplinary Sciences

The complete genome of an individual by massively parallel DNA sequencing

David A. Wheeler et al.

NATURE (2008)

Article Multidisciplinary Sciences

The diploid genome sequence of an Asian individual

Jun Wang et al.

NATURE (2008)

Article Multidisciplinary Sciences

Accurate whole human genome sequencing using reversible terminator chemistry

David R. Bentley et al.

NATURE (2008)

Review Biochemistry & Molecular Biology

The diploid genome sequence of an individual human

Samuel Levy et al.

PLOS BIOLOGY (2007)

Article Biotechnology & Applied Microbiology

Genetic susceptibility to carbamazepine-induced cutaneous adverse drug reactions

Shuen-Lu Hung et al.

PHARMACOGENETICS AND GENOMICS (2006)

Article Pharmacology & Pharmacy

HLA-B locus in Caucasian patients with carbamazepine hypersensitivity

Ana Alfirevic et al.

PHARMACOGENOMICS (2006)

Article Multidisciplinary Sciences

Predisposition to abacavir hypersensitivity conferred by HLA-B*5701 and a haplotypic Hsp70-Hom variant

AM Martin et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Biochemistry & Molecular Biology

Complete MHC haplotype disease gene mapping

CA Stewart et al.

GENOME RESEARCH (2004)

Article Medicine, General & Internal

Genetic variations in HLA-B region and hypersensitivity reactions to abacavir

S Hetherington et al.

LANCET (2002)