4.7 Article

CORAL: Predictions of rate constants of hydroxyl radical reaction using representation of the molecular structure obtained by combination of SMILES and Graph approaches

Journal

CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS
Volume 112, Issue -, Pages 65-70

Publisher

ELSEVIER SCIENCE BV
DOI: 10.1016/j.chemolab.2011.12.003

Keywords

QSAR; Rate Constants of Hydroxyl Radical Reaction; CORAL software

Funding

  1. ANTARES [LIFE08-ENV/IT/00435]
  2. National Science Foundation (NSF) Interdisciplinary Nanotoxicity Center [HRD-0833178]
  3. NSF-Experimental Program to Stimulate Competitive Research Award [362492-190200-01\NSFEPS0903787]

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New version of CORAL software is now available on the Internet (http://www.insilico.eu/CORAL/). Previous versions of this software built up a quantitative structure-property/activity relationships (QSPR/QSAR) based on representation of the molecular structure by the simplified molecular input line entry system (SMILES). The present study has shown that the novel 'hybrid' representation of molecular structure by combination of SMILES and the molecular graph can improve the predictive potential of CORAL models. The evaluation of this approach has been performed for a large (n = 460) set of heterogeneous organic compounds. The tested endpoint represent rate constants of hydroxyl radical reaction of polybrominated diphenyl ethers and (benzo-)triazoles. (c) 2011 Elsevier B.V. All rights reserved.

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