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Designed Folding of Pseudopeptides: The Transformation of a Configurationally Driven Preorganization into a Stereoselective Multicomponent Macrocyclization Reaction

Journal

CHEMISTRY-A EUROPEAN JOURNAL
Volume 14, Issue 29, Pages 8879-8891

Publisher

WILEY-V C H VERLAG GMBH
DOI: 10.1002/chem.200800726

Keywords

conformation analysis; foldamers; macrocycles; peptide-like structures; preorganization

Funding

  1. Spanish Ministerio de Educacion y Ciencia [CTQ2006-15672-C05-02]
  2. CSIC-13 [2007801001]
  3. Bancaixa-UJI [P11B2004-38]

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The efficient synthesis of large-ring pseudopeptidic macrocycles through a multicomponent [2+2] reductive amination reaction is described. The reaction was entirely governed by the structural information contained in the corresponding open-chain pseudopeptidic bis(amidoamine) precursors, which have a rigid (R,R)-cyclohexane1,2-diaminc moiety. A remarkable match/mismatch relationship between the configurations of the chiral centers of the cyclic diamine and those of the peptidic frame was observed. The macrocyclic tetraimine intermediates have been studied in detail by NMR spectroscopy, circular dichroism (M), and molecular modeling, and the results support the appropriate preorganization induced by the match combination of the chiral centers. We have also synthesized the corresponding open-chain bis(imine) model compounds. The structural studies (NMR spectroscopy, CD, modeling) of these systems showed an intrinsically lower reactivity of the mismatch combination, even when the product of the reaction was acyclic. In addition, a synergistic effect between the two chiral substructures for the correct folding of the molecules was observed. Finally, X-ray analysis of the HCI salt of one of the macrocycles showed an interesting pattern; the macrocyclic rings stack in columnar aggregates leaving large interstitial channels filled with water-solvated chloride anions.

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