4.4 Article

Protonation of Nucleobases in Single- and Double-Stranded DNA

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

A primary role of TET proteins in establishment and maintenance of De Novo bivalency at CpG islands

Lingchun Kong et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Biochemistry & Molecular Biology

Determination of pKa values for deprotonable nucleobases in short model oligonucleotides

Julio C. Gonzalez-Olvera et al.

BIOPHYSICAL CHEMISTRY (2015)

Article Chemistry, Physical

N3 and O2 Protonated Tautomeric Conformations of 2′-Deoxycytidine and Cytidine Coexist in the Gas Phase

R. R. Wu et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2015)

Article Chemistry, Organic

Regulation of telomeric i-motif stability by 5-methylcytosine and 5-hydroxymethylcytosine modification

Baochang Xu et al.

ORGANIC & BIOMOLECULAR CHEMISTRY (2015)

Review Genetics & Heredity

Epigenetic regulatory functions of DNA modifications: 5-methylcytosine and beyond

Achim Breiling et al.

EPIGENETICS & CHROMATIN (2015)

Article Biochemistry & Molecular Biology

Landscape of DNA methylation on the X chromosome reflects CpG density, functional chromatin state and X-chromosome inactivation

Allison M. Cotton et al.

HUMAN MOLECULAR GENETICS (2015)

Article Chemistry, Multidisciplinary

Intrinsic Acid-Base Properties of a Hexa-2-deoxynucleoside Pentaphosphate, d(ApGpGpCpCpT): Neighboring Effects and Isomeric Equilibria

Alicia Dominguez-Martin et al.

CHEMISTRY-A EUROPEAN JOURNAL (2013)

Article Chemistry, Multidisciplinary

Characterizing the Protonation State of Cytosine in Transient G•C Hoogsteen Base Pairs in Duplex DNA

Evgenia N. Nikolova et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)

Review Chemistry, Multidisciplinary

Role of pKa of Nucleobases in the Origins of Chemical Evolution

Ramanarayanan Krishnamurthy

ACCOUNTS OF CHEMICAL RESEARCH (2012)

Article Biochemistry & Molecular Biology

Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA

Jeffrey E. Squires et al.

NUCLEIC ACIDS RESEARCH (2012)

Review Cell Biology

CpG islands and the regulation of transcription

Aimee M. Deaton et al.

GENES & DEVELOPMENT (2011)

Article Biochemistry & Molecular Biology

DNA methylation profiles of human active and inactive X chromosomes

Andrew J. Sharp et al.

GENOME RESEARCH (2011)

Article Multidisciplinary Sciences

Tet Proteins Can Convert 5-Methylcytosine to 5-Formylcytosine and 5-Carboxylcytosine

Shinsuke Ito et al.

SCIENCE (2011)

Article Biochemistry & Molecular Biology

tRNA Stabilization by Modified Nucleotides

Yuri Motorin et al.

BIOCHEMISTRY (2010)

Article Biochemistry & Molecular Biology

5-methylcytosine in RNA: detection, enzymatic formation and biological functions

Yuri Motorin et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Chemistry, Multidisciplinary

Comparison of the acid-base properties of ribose and 2 '-deoxyribose nucleotides

Ariel Mucha et al.

CHEMISTRY-A EUROPEAN JOURNAL (2008)

Article Chemistry, Multidisciplinary

Discrimination in metal-ion binding to RNA dinucleotides with a non-bridging oxygen or sulfur in the phosphate diester link

Bernd Knobloch et al.

CHEMISTRY-A EUROPEAN JOURNAL (2008)

Article Biochemistry & Molecular Biology

Linkage between proton binding and folding in RNA: implications for RNA catalysis

PC Bevilacqua et al.

BIOCHEMICAL SOCIETY TRANSACTIONS (2005)

Article Chemistry, Multidisciplinary

Cross-modulation of the pKa of nucleobases in a single-stranded hexameric-RNA due to tandem electrostatic nearest-neighbor interactions

P Acharya et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)

Article Chemistry, Multidisciplinary

Tandem electrostatic effect from the first to the third aglycon in the trimeric RNA owing to the nearest-neighbor interaction

P Acharya et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)

Article Multidisciplinary Sciences

The structural basis of ribosome activity in peptide bond synthesis

P Nissen et al.

SCIENCE (2000)

Article Multidisciplinary Sciences

General acid-base catalysis in the mechanism of a hepatitis delta virus ribozyme

S Nakano et al.

SCIENCE (2000)