4.5 Article

Reference based annotation with GeneMapper

Journal

GENOME BIOLOGY
Volume 7, Issue 4, Pages -

Publisher

BIOMED CENTRAL LTD
DOI: 10.1186/gb-2006-7-4-r29

Keywords

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Funding

  1. NHGRI NIH HHS [U01:HG003150-01, U01 HG003150, R01:HG02632-1, R43 HG002632] Funding Source: Medline
  2. NATIONAL HUMAN GENOME RESEARCH INSTITUTE [U01HG003150, R43HG002632] Funding Source: NIH RePORTER

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We introduce GeneMapper, a program for transferring annotations from a well annotated genome to other genomes. Drawing on high quality curated annotations, GeneMapper enables rapid and accurate annotation of newly sequenced genomes and is suitable for both finished and draft genomes. GeneMapper uses a profile based approach for mapping genes into multiple species, improving upon the standard pairwise approach. GeneMapper is freely available for academic use.

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