4.7 Article

Locus-specific mutation databases: pitfalls and good practice based on the p53 experience

Journal

NATURE REVIEWS CANCER
Volume 6, Issue 1, Pages 83-90

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NATURE PUBLISHING GROUP
DOI: 10.1038/nrc1783

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Between 50,000 and 60,000 mutations have been described in various genes that are associated with a wide variety of diseases. Reporting, storing and analysing these data is an important challenge as such data provide invaluable information for both clinical medicine and basic science. Locus- specific databases have been developed to exploit this huge volume of data. The p53 mutation database is a paradigm, as it constitutes the largest collection of somatic mutations ( 22,000). However, there are several biases in this database that can lead to serious erroneous interpretations. We describe several rules for mutation database management that could benefit the entire scientific community.

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