Journal
GENOME BIOLOGY
Volume 8, Issue 8, Pages -Publisher
BIOMED CENTRAL LTD
DOI: 10.1186/gb-2007-8-8-r171
Keywords
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Funding
- NIGMS NIH HHS [T32 GM065103, T32 GM142607, T32 GM008759] Funding Source: Medline
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We have implemented in Python the COmparative GENomic Toolkit, a fully integrated and thoroughly tested framework for novel probabilistic analyses of biological sequences, devising workflows, and generating publication quality graphics. PyCogent includes connectors to remote databases, built-in generalized probabilistic techniques for working with biological sequences, and controllers for third-party applications. The toolkit takes advantage of parallel architectures and runs on a range of hardware and operating systems, and is available under the general public license from http://sourceforge.net/projects/pycogent.
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