Related references
Note: Only part of the references are listed.Metab2MeSH: annotating compounds with medical subject headings
Maureen A. Sartor et al.
BIOINFORMATICS (2012)
Gene set enrichment analysis: performance evaluation and usage guidelines
Jui-Hung Hung et al.
BRIEFINGS IN BIOINFORMATICS (2012)
The dynamic range of the human metabolome revealed by challenges
Susanne Krug et al.
FASEB JOURNAL (2012)
Metabolomics: the apogee of the omics trilogy
Gary J. Patti et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2012)
YMDB: the Yeast Metabolome Database
Timothy Jewison et al.
NUCLEIC ACIDS RESEARCH (2012)
Paintomics: a web based tool for the joint visualization of transcriptomics and metabolomics data
Fernando Garcia-Alcalde et al.
BIOINFORMATICS (2011)
MGV: a generic graph viewer for comparative omics data
Stephan Symons et al.
BIOINFORMATICS (2011)
MPEA-metabolite pathway enrichment analysis
Matti Kankainen et al.
BIOINFORMATICS (2011)
MBRole: enrichment analysis of metabolomic data
Monica Chagoyen et al.
BIOINFORMATICS (2011)
Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA
Atanas Kamburov et al.
BIOINFORMATICS (2011)
NMR-spectroscopic analysis of mixtures: from structure to function
Ry R. Forseth et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2011)
Mass Spectrometry Strategies in Metabolomics
Zhentian Lei et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2011)
Profiling metabolites and peptides in single cells
Stanislav S. Rubakhin et al.
NATURE METHODS (2011)
Pathos: A web facility that uses metabolic maps to display experimental changes in metabolites identified by mass spectrometry
David P. Leader et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2011)
Advances in metabolite identification
David S. Wishart
BIOANALYSIS (2011)
Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks
Jing Gao et al.
BIOINFORMATICS (2010)
The Chemical Translation Service-a web-based tool to improve standardization of metabolomic reports
Gert Wohlgemuth et al.
BIOINFORMATICS (2010)
MetPA: a web-based metabolomics tool for pathway analysis and visualization
Jianguo Xia et al.
BIOINFORMATICS (2010)
Mayday - integrative analytics for expression data
Florian Battke et al.
BMC BIOINFORMATICS (2010)
Database Resources in Metabolomics: An Overview
Eden P. Go
JOURNAL OF NEUROIMMUNE PHARMACOLOGY (2010)
SMPDB: The Small Molecule Pathway Database
Alex Frolkis et al.
NUCLEIC ACIDS RESEARCH (2010)
MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data
Jianguo Xia et al.
NUCLEIC ACIDS RESEARCH (2010)
So what have data standards ever done for us? The view from metabolomics
Julian L. Griffin et al.
GENOME MEDICINE (2010)
Interpreting Metabolomic Profiles using Unbiased Pathway Models
Rahul C. Deo et al.
PLOS COMPUTATIONAL BIOLOGY (2010)
Visualizing post genomics data-sets on customized pathway maps by ProMeTra – aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example
Heiko Neuweger et al.
BMC Systems Biology (2009)
What can metabolomics learn from genomics and proteomics?
Masanori Arita
CURRENT OPINION IN BIOTECHNOLOGY (2009)
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
Da Wei Huang et al.
NUCLEIC ACIDS RESEARCH (2009)
MetaboAnalyst: a web server for metabolomic data analysis and interpretation
Jianguo Xia et al.
NUCLEIC ACIDS RESEARCH (2009)
MeltDB: a software platform for the analysis and integration of metabolomics experiment data
Heiko Neuweger et al.
BIOINFORMATICS (2008)
Presenting and exploring biological pathways with PathVisio
Martijn P. van Iersel et al.
BMC BIOINFORMATICS (2008)
Metabolic phenotyping in health and disease
Elaine Holmes et al.
CELL (2008)
KEGG Atlas mapping for global analysis of metabolic pathways
Shujiro Okuda et al.
NUCLEIC ACIDS RESEARCH (2008)
iPath: interactive exploration of biochemical pathways and networks
Ivica Letunic et al.
TRENDS IN BIOCHEMICAL SCIENCES (2008)
WikiPathways: Pathway editing for the people
Alexander R. Pico et al.
PLOS BIOLOGY (2008)
STITCH: interaction networks of chemicals and proteins
Michael Kuhn et al.
NUCLEIC ACIDS RESEARCH (2008)
ChEBI: a database and ontology for chemical entities of biological interest
Kirill Degtyarenko et al.
NUCLEIC ACIDS RESEARCH (2008)
Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts
Olaf Beckonert et al.
NATURE PROTOCOLS (2007)
HMDB: the human metabolome database
David S. Wishart et al.
NUCLEIC ACIDS RESEARCH (2007)
Metabolomics Standards Workshop and the development of international standards for reporting metabolomics experimental results
Arthur L. Castle et al.
BRIEFINGS IN BIOINFORMATICS (2006)
VANTED: A system for advanced data analysis and visualization in the context of biological networks
BH Junker et al.
BMC BIOINFORMATICS (2006)
Metabolomics: Current technologies and future trends
Katherine Hollywood et al.
PROTEOMICS (2006)
The Pathway Tools cellular overview diagram and Omics Viewer
Suzanne M. Paley et al.
NUCLEIC ACIDS RESEARCH (2006)
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
A Subramanian et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
KaPPA-View. A web-based analysis tool for integration of transcript and metabolite data on plant metabolic pathway maps
T Tokimatsu et al.
PLANT PHYSIOLOGY (2005)
Reactome: a knowledgebase of biological pathways
G Joshi-Tope et al.
NUCLEIC ACIDS RESEARCH (2005)
Environmental genome shotgun sequencing of the Sargasso Sea
JC Venter et al.
SCIENCE (2004)
MAPMAN:: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes
O Thimm et al.
PLANT JOURNAL (2004)
PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes
VK Mootha et al.
NATURE GENETICS (2003)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)