Related references
Note: Only part of the references are listed.Tools to kill: Genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina
Md Shahidul Islam et al.
BMC GENOMICS (2012)
Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses
Richard J. O'Connell et al.
NATURE GENETICS (2012)
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
Cole Trapnell et al.
NATURE PROTOCOLS (2012)
The Corky Root Rot Pathogen Pyrenochaeta lycopersici Secretes a Proteinaceous Inducer of Cell Death Affecting Host Plants Differentially
Pierre-Henri Clergeot et al.
PHYTOPATHOLOGY (2012)
CAPRG: Sequence Assembling Pipeline for Next Generation Sequencing of Non-Model Organisms
Arun Rawat et al.
PLOS ONE (2012)
Genomic Clustering and Homology between HET-S and the NWD2 STAND Protein in Various Fungal Genomes
Asen Daskalov et al.
PLOS ONE (2012)
Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi
Robin A. Ohm et al.
PLOS PATHOGENS (2012)
Cellobiose Dehydrogenase and a Copper-Dependent Polysaccharide Monooxygenase Potentiate Cellulose Degradation by Neurospora crassa
Christopher M. Phillips et al.
ACS CHEMICAL BIOLOGY (2011)
Identification of novel transcripts in annotated genomes using RNA-Seq
Adam Roberts et al.
BIOINFORMATICS (2011)
Molecular and functional characterization of an endoglucanase in the phytopathogenic fungus Pyrenochaeta lycopersici
Maria Teresa Valente et al.
CURRENT GENETICS (2011)
Accelerated Profile HMM Searches
Sean R. Eddy
PLOS COMPUTATIONAL BIOLOGY (2011)
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
Stephen B. Goodwin et al.
PLOS GENETICS (2011)
Stimulation of Lignocellulosic Biomass Hydrolysis by Proteins of Glycoside Hydrolase Family 61: Structure and Function of a Large, Enigmatic Family
Paul V. Harris et al.
BIOCHEMISTRY (2010)
Regulation of multidrug resistance in pathogenic fungi
Joachim Morschhaeuser
FUNGAL GENETICS AND BIOLOGY (2010)
Assembly algorithms for next-generation sequencing data
Jason R. Miller et al.
GENOMICS (2010)
Identifying and Quantifying Orphan Protein Sequences in Fungi
Diana Ekman et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
The prion hypothesis: from biological anomaly to basic regulatory mechanism
Mick F. Tuite et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2010)
Evolution and Diversity of a Fungal Self/Nonself Recognition Locus
Charles Hall et al.
PLOS ONE (2010)
De novo Assembly of a 40 Mb Eukaryotic Genome from Short Sequence Reads: Sordaria macrospora, a Model Organism for Fungal Morphogenesis
Minou Nowrousian et al.
PLOS GENETICS (2010)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
A fungal phylogeny based on 82 complete genomes using the composition vector method
Hao Wang et al.
BMC EVOLUTIONARY BIOLOGY (2009)
Heterokaryons and parasexual recombinants of Cryphonectria parasitica in two clonal populations in southeastern Europe
Michael G. Milgroom et al.
FUNGAL GENETICS AND BIOLOGY (2009)
Assessing the gene space in draft genomes
Genis Parra et al.
NUCLEIC ACIDS RESEARCH (2009)
Efflux in Fungi: La Piece de Resistance
Jeffrey J. Coleman et al.
PLOS PATHOGENS (2009)
Host-specific toxins: effectors of necrotrophic pathogenicity
Timothy L. Friesen et al.
CELLULAR MICROBIOLOGY (2008)
Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training
Vardges Ter-Hovhannisyan et al.
GENOME RESEARCH (2008)
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino et al.
GENOME RESEARCH (2008)
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine
Lei Kong et al.
NUCLEIC ACIDS RESEARCH (2007)
TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels
Qinghu Ren et al.
NUCLEIC ACIDS RESEARCH (2007)
Impact of fungal drug transporters on fungicide sensitivity, multidrug resistance and virulence
MA de Waard et al.
PEST MANAGEMENT SCIENCE (2006)
Fungal secondary metabolism - From biochemistry to genomics
NP Keller et al.
NATURE REVIEWS MICROBIOLOGY (2005)
Blast2GO:: a universal tool for annotation, visualization and analysis in functional genomics research
A Conesa et al.
BIOINFORMATICS (2005)
GMAP: a genomic mapping and alignment program for mRNA and EST sequences
TD Wu et al.
BIOINFORMATICS (2005)
Functional analysis of tvsp1, a serine protease-encoding gene in the biocontrol agent Trichoderma virens
MJ Pozo et al.
FUNGAL GENETICS AND BIOLOGY (2004)
Molecular and physiological characterization of Italian isolates of Pyrenochaeta lycopersici
A Infantino et al.
MYCOLOGICAL RESEARCH (2003)