4.7 Article

Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors

Related references

Note: Only part of the references are listed.
Review Plant Sciences

The Genomics of Obligate (and Nonobligate) Biotrophs

Pietro D. Spanu

ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 50 (2012)

Article Biochemistry & Molecular Biology

A Comprehensive Analysis of Genes Encoding Small Secreted Proteins Identifies Candidate Effectors in Melampsora larici-populina (Poplar Leaf Rust)

Stephane Hacquard et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2012)

Review Plant Sciences

Understanding and Exploiting Late Blight Resistance in the Age of Effectors

Vivianne G. A. A. Vleeshouwers et al.

ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 49 (2011)

Review Plant Sciences

Diversity of Puccinia striiformis on Cereals and Grasses

Mogens S. Hovmoller et al.

ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 49 (2011)

Article Biotechnology & Applied Microbiology

Full-length transcriptome assembly from RNA-Seq data without a reference genome

Manfred G. Grabherr et al.

NATURE BIOTECHNOLOGY (2011)

Article Genetics & Heredity

A framework for variation discovery and genotyping using next-generation DNA sequencing data

Mark A. DePristo et al.

NATURE GENETICS (2011)

Article Multidisciplinary Sciences

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

Sebastien Duplessis et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biotechnology & Applied Microbiology

Powdery mildew fungal effector candidates share N-terminal Y/F/WxC-motif

Dale Godfrey et al.

BMC GENOMICS (2010)

Article Multidisciplinary Sciences

A map of human genome variation from population-scale sequencing

David Altshuler et al.

NATURE (2010)

Editorial Material Multidisciplinary Sciences

Escalating Threat of Wheat Rusts

Mogens Stovring Hovmoller et al.

SCIENCE (2010)

Article Biotechnology & Applied Microbiology

Differential expression analysis for sequence count data

Simon Anders et al.

GENOME BIOLOGY (2010)

Article Biochemical Research Methods

T-REKS: identification of Tandem REpeats in sequences with a K-meanS based algorithm

Julien Jorda et al.

BIOINFORMATICS (2009)

Article Biochemistry & Molecular Biology

Circos: An information aesthetic for comparative genomics

Martin Krzywinski et al.

GENOME RESEARCH (2009)

Review Biochemistry & Molecular Biology

Emerging Concepts in Effector Biology of Plant-Associated Organisms

Saskia A. Hogenhout et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2009)

Article Multidisciplinary Sciences

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

Brian J. Haas et al.

NATURE (2009)

Article Biochemistry & Molecular Biology

Assessing the gene space in draft genomes

Genis Parra et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Biotechnology & Applied Microbiology

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead et al.

GENOME BIOLOGY (2009)

Article Biotechnology & Applied Microbiology

Stage-specific gene expression during urediniospore germination in Puccinia striiformis f. sp tritici

Yonghong Zhang et al.

BMC GENOMICS (2008)

Article Biochemistry & Molecular Biology

Rapid global spread of two aggressive strains of a wheat rust fungus

Mogens S. Hovmoller et al.

MOLECULAR ECOLOGY (2008)

Article Biochemistry & Molecular Biology

Comparative genome analysis across a kingdom of eukaryotic organisms: Specialization and diversification in the Fungi

Michael J. Cornell et al.

GENOME RESEARCH (2007)

Article Multidisciplinary Sciences

A translocation signal for delivery of oomycete effector proteins into host plant cells

Stephen C. Whisson et al.

NATURE (2007)

Article Biochemistry & Molecular Biology

PAML 4: Phylogenetic analysis by maximum likelihood

Ziheng Yang

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Article Biochemical Research Methods

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genornes

Genis Parra et al.

BIOINFORMATICS (2007)

Review Biochemical Research Methods

Locating proteins in the cell using TargetP, SignalP and related tools

Olof Emanuelsson et al.

NATURE PROTOCOLS (2007)

Review Multidisciplinary Sciences

The plant immune system

Jonathan D. G. Jones et al.

NATURE (2006)

Article Biochemical Research Methods

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

Weizhong Li et al.

BIOINFORMATICS (2006)

Article Multidisciplinary Sciences

Direct protein interaction underlies gene-for-gene specificity and coevolution of the flax resistance genes and flax rust avirulence genes

Peter N. Dodds et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasm

MR Armstrong et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemical Research Methods

Gene finding in novel genomes

I Korf

BMC BIOINFORMATICS (2004)

Article Biochemistry & Molecular Biology

An efficient algorithm for large-scale detection of protein families

AJ Enright et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemistry & Molecular Biology

Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes

A Krogh et al.

JOURNAL OF MOLECULAR BIOLOGY (2001)