Related references
Note: Only part of the references are listed.Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance
Barbara Feldmeyer et al.
BMC GENOMICS (2011)
De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity
Massimo Iorizzo et al.
BMC GENOMICS (2011)
Deep sequencing-based transcriptome analysis of Plutella xylostella larvae parasitized by Diadegma semiclausum
Kayvan Etebari et al.
BMC GENOMICS (2011)
RNA-seq: technical variability and sampling
Lauren M. McIntyre et al.
BMC GENOMICS (2011)
RNA-sequence analysis of human B-cells
Jonathan M. Toung et al.
GENOME RESEARCH (2011)
Critical assessment of assembly strategies for non-model species mRNA-Seq data and application of next-generation sequencing to the comparison of C3 and C4 species
Andrea Braeutigam et al.
JOURNAL OF EXPERIMENTAL BOTANY (2011)
Computational methods for transcriptome annotation and quantification using RNA-seq
Manuel Garber et al.
NATURE METHODS (2011)
Next-generation transcriptome assembly
Jeffrey A. Martin et al.
NATURE REVIEWS GENETICS (2011)
RNA-Seq analysis and de novo transcriptome assembly of Hevea brasiliensis
Zhihui Xia et al.
PLANT MOLECULAR BIOLOGY (2011)
The real cost of sequencing: higher than you think!
Andrea Sboner et al.
GENOME BIOLOGY (2011)
Population-level transcriptome sequencing of nonmodel organisms Erynnis propertius and Papilio zelicaon
Shawn T. O'Neil et al.
BMC GENOMICS (2010)
Comparing de novo assemblers for 454 transcriptome data
Sujai Kumar et al.
BMC GENOMICS (2010)
RNA-seq: from technology to biology
Samuel Marguerat et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2010)
Mammalian Evolution May not Be Strictly Bifurcating
Bjorn M. Hallstrom et al.
MOLECULAR BIOLOGY AND EVOLUTION (2010)
The transcriptomics of sympatric dwarf and normal lake whitefish (Coregonus clupeaformis spp., Salmonidae) divergence as revealed by next-generation sequencing
Julie Jeukens et al.
MOLECULAR ECOLOGY (2010)
Advancing RNA-Seq analysis
Brian J. Haas et al.
NATURE BIOTECHNOLOGY (2010)
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell et al.
NATURE BIOTECHNOLOGY (2010)
Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing
Fabian Birzele et al.
NUCLEIC ACIDS RESEARCH (2010)
De Novo Transcriptome Sequencing in Anopheles funestus Using Illumina RNA-Seq Technology
Jacob E. Crawford et al.
PLOS ONE (2010)
Comparison of next generation sequencing technologies for transcriptome characterization
P. Kerr Wall et al.
BMC GENOMICS (2009)
Expression profiling of microRNAs by deep sequencing
Chad J. Creighton et al.
BRIEFINGS IN BIOINFORMATICS (2009)
The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes
Kim D. Pruitt et al.
GENOME RESEARCH (2009)
Benchmarking Next-Generation Transcriptome Sequencing for Functional and Evolutionary Genomics
John G. Gibbons et al.
MOLECULAR BIOLOGY AND EVOLUTION (2009)
RNA-Seq: a revolutionary tool for transcriptomics
Zhong Wang et al.
NATURE REVIEWS GENETICS (2009)
Resolution among major placental mammal interordinal relationships with genome data imply that speciation influenced their earliest radiations
Bjoern M. Hallstroem et al.
BMC EVOLUTIONARY BIOLOGY (2008)
High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome
Evandro Novaes et al.
BMC GENOMICS (2008)
RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
John C. Marioni et al.
GENOME RESEARCH (2008)
Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing
J. Cristobal Vera et al.
MOLECULAR ECOLOGY (2008)
Mapping and quantifying mammalian transcriptomes by RNA-Seq
Ali Mortazavi et al.
NATURE METHODS (2008)
The transcriptional landscape of the yeast genome defined by RNA sequencing
Ugrappa Nagalakshmi et al.
SCIENCE (2008)
Sampling the arabidopsis transcriptome with massively parallel pyrosequencing
Andreas P. M. Weber et al.
PLANT PHYSIOLOGY (2007)
Using genomic data to unravel the root of the placental mammal phylogeny
William J. Murphy et al.
GENOME RESEARCH (2007)
Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology
Foo Cheung et al.
BMC GENOMICS (2006)
The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements
Leming Shi et al.
NATURE BIOTECHNOLOGY (2006)
BABELOMICS:: a systems biology perspective in the functional annotation of genome-scale experiments
Fatima Al-Shahrour et al.
NUCLEIC ACIDS RESEARCH (2006)
Estimation of divergence times for major lineages of primate species
GV Glazko et al.
MOLECULAR BIOLOGY AND EVOLUTION (2003)
Share Paper
