4.5 Article

Substantial expression of novel small open reading frames in Oryza sativa

Journal

PLANT SIGNALING & BEHAVIOR
Volume 9, Issue 2, Pages -

Publisher

TAYLOR & FRANCIS INC
DOI: 10.4161/psb.27848

Keywords

small open reading frame; comparative genomics; small peptide; Arabidopsis; rice

Funding

  1. Program for Promotion of Basic and Applied Researches for Innovations in Bio-oriented Industry (BRAIN)
  2. Core Research for Evolutional Science and Technology (CREST) Program Creation of essential technologies
  3. Japan Science and Technology Agency (JST)

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In our previous integrated study combining informatics and molecular biology analyses, we revealed that Arabidopsis small open reading frames (sORFs) predicted by computational analysis have biological functions in morphogenesis. Here, we report that sequences homologous to Arabidopsis sORFs are abundant in intergenic regions of the rice genome. These sequences represent a subset of non-protein-coding DNA, and some are transcribed into mRNA. These results indicate that many sORFs associated with morphogenesis are hidden in the genomes of crop species.

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