Related references
Note: Only part of the references are listed.Scoring by Intermolecular Pairwise Propensities of Exposed Residues (SIPPER): A New Efficient Potential for Protein-Protein Docking
Carles Pons et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2011)
A geometry-based generic predictor for catalytic and allosteric sites
Simon Mitternacht et al.
PROTEIN ENGINEERING DESIGN & SELECTION (2011)
Present and future challenges and limitations in protein-protein docking
Carles Pons et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2010)
Optimization of pyDock for the new CAPRI challenges: Docking of homology-based models, domain-domain assembly and protein-RNA binding
Carles Pons et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2010)
Protein-protein docking benchmark version 4.0
Howook Hwang et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2010)
FRODOCK: a new approach for fast rotational protein-protein docking
Jose Ignacio Garzon et al.
BIOINFORMATICS (2009)
Exploiting structural and topological information to improve prediction of RNA-protein binding sites
Stefan R. Maetschke et al.
BMC BIOINFORMATICS (2009)
The protein meta-structure: a novel concept for chemical and molecular biology
Robert Konrat
CELLULAR AND MOLECULAR LIFE SCIENCES (2009)
Defining an Essence of Structure Determining Residue Contacts in Proteins
R. Sathyapriya et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
Integrating diverse data for structure determination of macromolecular assemblies
Frank Alber et al.
ANNUAL REVIEW OF BIOCHEMISTRY (2008)
Amino acid network and its scoring application in protein-protein docking
Shan Chang et al.
BIOPHYSICAL CHEMISTRY (2008)
Recent progress and future directions in protein-protein docking
David W. Ritchie
CURRENT PROTEIN & PEPTIDE SCIENCE (2008)
Revealing unique properties of the ribosome using a network based analysis
Hilda David-Eden et al.
NUCLEIC ACIDS RESEARCH (2008)
Protein-protein docking benchmark version 3.0
Howook Hwang et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2008)
Insights into Protein-DNA Interactions through Structure Network Analysis
R. Sathyapriya et al.
PLOS COMPUTATIONAL BIOLOGY (2008)
Computer-Based Screening of Functional Conformers of Proteins
Hector Marlosti Montiel Molina et al.
PLOS COMPUTATIONAL BIOLOGY (2008)
The molecular sociology of the cell
Carol V. Robinson et al.
NATURE (2007)
Prediction and scoring of docking poses with pyDock
Solene Grosdidier et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
Integrating statistical pair potentials into protein complex prediction
Julian Mintseris et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
pyDock: Electrostatics and desolvation for effective scoring of rigid-body protein-protein docking
Tammy Man-Kuang Cheng et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
Ligand binding and circular permutation modify residue interaction network in DHFR
Zengjian Hu et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
PIPER: An FFT-based protein docking program with pairwise potentials
Dima Kozakov et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2006)
Residue centrality, functionally important residues, and active site shape: Analysis of enzyme and non-enzyme families
Antonio del Sol et al.
PROTEIN SCIENCE (2006)
Structural systems biology: modelling protein interactions
P Aloy et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2006)
Towards a proteome-scale map of the human protein-protein interaction network
JF Rual et al.
NATURE (2005)
ATTRAACT: Protein-protein docking in CAPRI using a reduced protein model
M Zacharias
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2005)
Network analysis of protein structures identifies functional residues
G Amitai et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
A structural perspective on protein-protein interactions
RB Russell et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2004)
Small-world communication of residues and significance for protein dynamics
AR Atilgan et al.
BIOPHYSICAL JOURNAL (2004)
Uncovering network systems within protein structures
LH Greene et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Topological determinants of protein folding
NV Dokholyan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)