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DCEO Biotechnology: Tools To Design, Construct, Evaluate, and Optimize the Metabolic Pathway for Biosynthesis of Chemicals

Journal

CHEMICAL REVIEWS
Volume 118, Issue 1, Pages 4-72

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/acs.chemrev.6b00804

Keywords

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Funding

  1. National Natural Science Foundation of China [21676118, 21422602]
  2. Provincial Natural Science Foundation of Jiangsu Province [BK20160163]
  3. Special Foundation for State Key Research and Development Program of China [2016YFD0400801]
  4. Major State Basic Research Development Program of China [2013CB733602]
  5. National Science Foundation for Postdoctoral Scientists of China [2016M600362]
  6. Fundamental Research Funds for the Central Universities [JUSR-P51611A]
  7. Novo Nordisk Foundation
  8. Knut and Alice Wallenberg Foundation
  9. Novo Nordisk Fonden [NNF10CC1016517] Funding Source: researchfish
  10. NNF Center for Biosustainability [Yeast Cell Factories] Funding Source: researchfish

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Chemical synthesis is a well established route for producing many chemicals on a large scale, but some drawbacks still exist in this process, such as unstable intermediates, multistep reactions, complex process control, etc. Biobased production provides an attractive alternative to these challenges, but how to make cells into efficient factories is challenging. As a key enabling technology to develop efficient cell factories, design-construction-evaluation-optimization (DCEO) biotechnology, which incorporates the concepts and techniques of pathway design, pathway construction, pathway evaluation, and pathway optimization at the systems level, offers a conceptual and technological framework to exploit potential pathways, modify existing pathways and create new pathways for the optimal production of desired chemicals. Here, we summarize recent progress of DCEO biotechnology and examples of its application, and provide insights as to when, what and how different strategies should be taken. In addition, we highlight future perspectives of DCEO biotechnology for the successful establishment of biorefineries.

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