4.7 Article

MAGI: a Node.js web service for fast microRNA-Seq analysis in a GPU infrastructure

Journal

BIOINFORMATICS
Volume 30, Issue 19, Pages 2826-2827

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btu377

Keywords

-

Funding

  1. NIH [U54HL108460]

Ask authors/readers for more resources

A Summary: MAGI is a web service for fast MicroRNA-Seq data analysis in a graphics processing unit (GPU) infrastructure. Using just a browser, users have access to results as web reports in just a few hours- >600% end-to-end performance improvement over state of the art. MAGI's salient features are (i) transfer of large input files in native FASTA with Qualities (FASTQ) format through drag-and-drop operations, (ii) rapid prediction of microRNA target genes leveraging parallel computing with GPU devices, (iii) all-in-one analytics with novel feature extraction, statistical test for differential expression and diagnostic plot generation for quality control and (iv) interactive visualization and exploration of results in web reports that are readily available for publication.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

No Data Available
No Data Available