4.7 Article

PHISTO: pathogen-host interaction search tool

Journal

BIOINFORMATICS
Volume 29, Issue 10, Pages 1357-+

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btt137

Keywords

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Funding

  1. Bogazici University [5554D]
  2. Marie Curie
  3. Ekin Kimya Tic. Ltd.
  4. Sti. and Elginkan Foundation

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Knowledge of pathogen-host protein interactions is required to better understand infection mechanisms. The pathogen-host interaction search tool (PHISTO) is a web-accessible platform that provides relevant information about pathogen-host interactions (PHIs). It enables access to the most up-to-date PHI data for all pathogen types for which experimentally verified protein interactions with human are available. The platform also offers integrated tools for visualization of PHI networks, graph-theoretical analysis of targeted human proteins, BLAST search and text mining for detecting missing experimental methods. PHISTO will facilitate PHI studies that provide potential therapeutic targets for infectious diseases.

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