4.7 Article

Adjusting scoring matrices to correct overextended alignments

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

The Pfam protein families database

Marco Punta et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemical Research Methods

RefProtDom: a protein database with improved domain boundaries and homology relationships

Mileidy W. Gonzalez et al.

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

Homologous over-extension: a challenge for iterative similarity searches

Mileidy W. Gonzalez et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemical Research Methods

BLAST plus : architecture and applications

Christiam Camacho et al.

BMC BIOINFORMATICS (2009)

Review Biochemistry & Molecular Biology

The limits of protein sequence comparison?

WR Pearson et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2005)

Article Biochemical Research Methods

Empirical determination of effective gap penalties for sequence comparison

JT Reese et al.

BIOINFORMATICS (2002)

Article Biochemical Research Methods

A new approach to sequence comparison:: normalired sequence alignment

AN Arslan et al.

BIOINFORMATICS (2001)