Journal
BIOINFORMATICS
Volume 28, Issue 23, Pages 3163-3165Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/bts577
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Funding
- Wellcome Trust [067205, 082598, 090297]
- National Human Genome Research Institute [R01HG004834]
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InterMine is an open-source data warehouse system that facilitates the building of databases with complex data integration requirements and a need for a fast customizable query facility. Using InterMine, large biological databases can be created from a range of heterogeneous data sources, and the extensible data model allows for easy integration of new data types. The analysis tools include a flexible query builder, genomic region search and a library of 'widgets' performing various statistical analyses. The results can be exported in many commonly used formats. InterMine is a fully extensible framework where developers can add new tools and functionality. Additionally, there is a comprehensive set of web services, for which client libraries are provided in five commonly used programming languages.
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