4.7 Article

HiTC: exploration of high-throughput 'C' experiments

Journal

BIOINFORMATICS
Volume 28, Issue 21, Pages 2843-2844

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/bts521

Keywords

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Funding

  1. French program 'investissement d'avenir' action bioinformatique (ABS4NGS project)
  2. Ministere de la Recherche et de l'Enseignement Superieur
  3. ARC
  4. EU EpiGeneSys FP7 Network of Excellence [257082]
  5. Fondation pour la Recherche Medicale, ANR, ERC Advanced Investigator award [250367]
  6. EU FP7 SYBOSS [242129]
  7. MODHEP [259743]
  8. NIH [R01 HG003143]
  9. W.M. Keck Foundation Distinguished Young Scholar Award

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The R/Bioconductor package HiTC facilitates the exploration of high-throughput 3C-based data. It allows users to import and export 'C' data, to transform, normalize, annotate and visualize interaction maps. The package operates within the Bioconductor framework and thus offers new opportunities for future development in this field.

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