Journal
BIOINFORMATICS
Volume 27, Issue 23, Pages 3317-3318Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btr548
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Funding
- National Library of Medicine [R01 LM009719, T15 LM007033]
- Howard Hughes Medical Institute
- Hewlett Packard Foundation
- Lucile Packard Foundation for Children's Health
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We introduce ProfileChaser, a web server that allows for querying the Gene Expression Omnibus based on genomewide patterns of differential expression. Using a novel, content-based approach, ProfileChaser retrieves expression profiles that match the differentially regulated transcriptional programs in a user-supplied experiment. This analysis identifies statistical links to similar expression experiments from the vast array of publicly available data on diseases, drugs, phenotypes and other experimental conditions.
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