4.7 Article

Ruffus: a lightweight Python library for computational pipelines

Journal

BIOINFORMATICS
Volume 26, Issue 21, Pages 2778-2779

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btq524

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Funding

  1. Medical Research Council
  2. MRC [MC_U137761446] Funding Source: UKRI
  3. Medical Research Council [MC_U137761446] Funding Source: researchfish

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Computational pipelines are common place in scientific research. However, most of the resources for constructing pipelines are heavyweight systems with graphical user interfaces. Ruffus is a library for the creation of computational pipelines. Its lightweight and unobtrusive design recommends it for use even for the most trivial of analyses. At the same time, it is powerful enough to have been used for complex workflows involving more than 50 interdependent stages.

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