4.7 Article

Genome-wide synteny through highly sensitive sequence alignment: Satsuma

Related references

Note: Only part of the references are listed.
Article Computer Science, Software Engineering

MizBee: A Multiscale Synteny Browser

Miriah Meyer et al.

IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS (2009)

Article Multidisciplinary Sciences

The Sorghum bicolor genome and the diversification of grasses

Andrew H. Paterson et al.

NATURE (2009)

Article Multidisciplinary Sciences

Local DNA Topography Correlates with Functional Noncoding Regions of the Human Genome

Stephen C. J. Parker et al.

SCIENCE (2009)

Article Biochemistry & Molecular Biology

The whole alignment and nothing but the alignment: the problem of spurious alignment flanks

Martin C. Frith et al.

NUCLEIC ACIDS RESEARCH (2008)

Review Multidisciplinary Sciences

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

Tarjei S. Mikkelsen et al.

NATURE (2007)

Review Multidisciplinary Sciences

Genome sequence, comparative analysis and haplotype structure of the domestic dog

K Lindblad-Toh et al.

NATURE (2005)

Article Biochemistry & Molecular Biology

The Genomes of Oryza sativa:: A history of duplications

J Yu et al.

PLOS BIOLOGY (2005)

Article Multidisciplinary Sciences

Evolution's cauldron: Duplication, deletion, and rearrangement in the mouse and human genomes

WJ Kent et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Biochemistry & Molecular Biology

Human-mouse alignments with BLASTZ

S Schwartz et al.

GENOME RESEARCH (2003)

Article Biochemistry & Molecular Biology

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

K Katoh et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemical Research Methods

PatternHunter: faster and more sensitive homology search

B Ma et al.

BIOINFORMATICS (2002)

Article Biochemical Research Methods

A greedy algorithm for aligning DNA sequences

Z Zhang et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2000)