4.7 Article

A UIMA wrapper for the NCBO annotator

Journal

BIOINFORMATICS
Volume 26, Issue 14, Pages 1800-1801

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btq250

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Funding

  1. National Institutes of Health [5R01-GM083649-02, 2R01-LM008111-04A1, 2R01-LM009254-04]
  2. National Center for Biomedical Ontology [U54 HG004028]

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The Unstructured Information Management Architecture (UIMA) framework and web services are emerging as useful tools for integrating biomedical text mining tools. This note describes our work, which wraps the National Center for Biomedical Ontology (NCBO) Annotator-an ontology-based annotation service-to make it available as a component in UIMA workflows.

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