4.7 Article

hPDI: a database of experimental human protein-DNA interactions

Journal

BIOINFORMATICS
Volume 26, Issue 2, Pages 287-289

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btp631

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Funding

  1. National Institutes of Health
  2. W. M. Keck Foundation
  3. Ruth and Milton Steinbach Fund

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The human protein DNA Interactome (hPDI) database holds experimental protein-DNA interaction data for humans identified by protein microarray assays. The unique characteristics of hPDI are that it contains consensus DNA-binding sequences not only for nearly 500 human transcription factors but also for >500 unconventional DNA-binding proteins, which are completely uncharacterized previously. Users can browse, search and download a subset or the entire data via a web interface. This database is freely accessible for any academic purposes.

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