☆ 4.7 Article

Generating linkage mapping files from Affymetrix SNP chip data

BIOINFORMATICS (2009)

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Journal

BIOINFORMATICS
Volume 25, Issue 15, Pages 1961-1962

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btp313

Keywords

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Categories

Biochemical Research Methods Biotechnology & Applied Microbiology Computer Science, Interdisciplinary Applications Mathematical & Computational Biology Statistics & Probability

Funding

  1. Australian National Health and Medical Research Council (NHMRC) [461269]
  2. NHMRC Program [490037]
  3. NHMRC Medical Genomics Bioinformatics and Proteomics Program [406657]

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LINKDATAGEN is a perl tool that generates linkage mapping input files for five different linkage mapping tools using data from all 11 HAPMAP Phase III populations. It provides rudimentary error checks and is easily amended for personal linkage mapping preferences.

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