Journal
BIOINFORMATICS
Volume 25, Issue 11, Pages 1428-1430Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btp180
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Funding
- Ministero dell'Universita e della Ricerca-Fondo per gli Investimenti della Ricerca di Base (MIUR-FIRB) [RBNE03PX83/001]
- MIUR-FIRB Progetto NG-lab [175]
- Progetti di Ricerca di Interesse Nazionale (PRIN) [2006034199]
- EU FP6-STREP program
- Dutch Nanotechnology network NanoNed [6939]
- [NMP4-CT-2004-013775]
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Hooke is an open source, extensible software intended for analysis of atomic force microscope (AFM)-based single molecule force spectroscopy (SMFS) data. We propose it as a platform on which published and new algorithms for SMFS analysis can be integrated in a standard, open fashion, as a general solution to the current lack of a standard software for SMFS data analysis. Specific features and support for. le formats are coded as independent plugins. Any user can code new plugins, extending the software capabilities. Basic automated dataset filtering and semi-automatic analysis facilities are included.
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