Journal
BIOINFORMATICS
Volume 24, Issue 23, Pages 2788-2789Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btn523
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Funding
- National Science Foundation [0109879]
- USDA-NRI Applied Plant Genomics Program [2004-35317-14867]
- Div Of Biological Infrastructure
- Direct For Biological Sciences [0109879] Funding Source: National Science Foundation
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Of many statistical methods developed to date for quantitative trait locus (QTL) analysis, only a limited subset are available in public software allowing their exploration, comparison and practical application by researchers. We have developed QGene 4.0, a plug-in platform that allows execution and comparison of a variety of modern QTL-mapping methods and supports third-party addition of new ones. The software accommodates line-cross mating designs consisting of any arbitrary sequence of selfing, backcrossing, intercrossing and haploid-doubling steps that includes map, population, and trait simulators; and is scriptable.
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