Journal
BIOINFORMATICS
Volume 24, Issue 21, Pages 2537-2538Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btn480
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Funding
- National Science Foundation [HG004563, HG003169]
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Tag sequencing using high-throughput sequencing technologies are now regularly employed to identify specific sequence features, such as transcription factor binding sites (ChIP-seq) or regions of open chromatin (DNase-seq). To intuitively summarize and display individual sequence data as an accurate and interpretable signal, we developed F-Seq, a software package that generates a continuous tag sequence density estimation allowing identification of biologically meaningful sites whose output can be displayed directly in the UCSC Genome Browser.
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