Journal
BIOINFORMATICS
Volume 24, Issue 23, Pages 2782-2783Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btn510
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- Rhone-Alpes Region
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Motivation: The technique of chemical cross-linking followed by mass spectrometry has proven to bring valuable information about the protein structure and interactions between proteic subunits. It is an effective and efficient way to experimentally investigate some aspects of a protein structure when NMR and X-ray crystallography data are lacking. Results: We introduce MSX-3D, a tool specifically geared to validate protein models using mass spectrometry. In addition to classical peptides identifications, it allows an interactive 3D visualization of the distance constraints derived from a cross-linking experiment.
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