Related references
Note: Only part of the references are listed.A method for evaluating the host range of bacteriophages using phages fluorescently labeled with 5-ethynyl-2′-deoxyuridine (EdU)
Sayaka Ohno et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2012)
Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method
Melissa B. Duhaime et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Characterization of the Viral Microbiome in Patients with Severe Lower Respiratory Tract Infections, Using Metagenomic Sequencing
Fredrik Lysholm et al.
PLOS ONE (2012)
Evaluation of Methods for the Extraction and Purification of DNA from the Human Microbiome
Sanqing Yuan et al.
PLOS ONE (2012)
Evaluating Characteristics of De Novo Assembly Software on 454 Transcriptome Data: A Simulation Approach
Marvin Mundry et al.
PLOS ONE (2012)
Comparison of DNA Extraction Methods for Microbial Community Profiling with an Application to Pediatric Bronchoalveolar Lavage Samples
Dana Willner et al.
PLOS ONE (2012)
Identification, Characterization, and In Vitro Culture of Highly Divergent Arenaviruses from Boa Constrictors and Annulated Tree Boas: Candidate Etiological Agents for Snake Inclusion Body Disease
Mark D. Stenglein et al.
MBIO (2012)
Evaluation of a Transposase Protocol for Rapid Generation of Shotgun High-Throughput Sequencing Libraries from Nanogram Quantities of DNA
Rachel Marine et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Amplification Methods Bias Metagenomic Libraries of Uncultured Single-Stranded and Double-Stranded DNA Viruses
Kyoung-Ho Kim et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Linear amplification for deep sequencing
Wieteke A. M. Hoeijmakers et al.
NATURE PROTOCOLS (2011)
Consider something viral in your research
Forest Rohwer et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Single Virus Genomics: A New Tool for Virus Discovery
Lisa Zeigler Allen et al.
PLOS ONE (2011)
Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets
Robert Schmieder et al.
PLOS ONE (2011)
Plantagora: Modeling Whole Genome Sequencing and Assembly of Plant Genomes
Roger Barthelson et al.
PLOS ONE (2011)
Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity
Dana Willner et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
A simple and efficient method for concentration of ocean viruses by chemical flocculation
Seth G. John et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2011)
Transfer of a Phage T4 Gene into Enterobacteriaceae, Determined at the Single-Cell Level
Takehiko Kenzaka et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
High-frequency phage-mediated gene transfer in freshwater environments determined at single-cell level
Takehiko Kenzaka et al.
ISME JOURNAL (2010)
Multiple displacement amplification compromises quantitative analysis of metagenomes
Suzan Yilmaz et al.
NATURE METHODS (2010)
Analysis of High-Throughput Sequencing and Annotation Strategies for Phage Genomes
Matthew R. Henn et al.
PLOS ONE (2010)
One Bacterial Cell, One Complete Genome
Tanja Woyke et al.
PLOS ONE (2010)
Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
Jenna L. Morgan et al.
PLOS ONE (2010)
Functional viral metagenomics and the next generation of molecular tools
Thomas Schoenfeld et al.
TRENDS IN MICROBIOLOGY (2010)
SOAP2: an improved ultrafast tool for short read alignment
Ruiqiang Li et al.
BIOINFORMATICS (2009)
Metagenomic signatures of 86 microbial and viral metagenomes
Dana Willner et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Laboratory procedures to generate viral metagenomes
Rebecca V. Thurber et al.
NATURE PROTOCOLS (2009)
OPINION Explaining microbial population genomics through phage predation
Francisco Rodriguez-Valera et al.
NATURE REVIEWS MICROBIOLOGY (2009)
Distinct Gene Number-Genome Size Relationships for Eukaryotes and Non-Eukaryotes: Gene Content Estimation for Dinoflagellate Genomes
Yubo Hou et al.
PLOS ONE (2009)
Metagenomic Analysis of Respiratory Tract DNA Viral Communities in Cystic Fibrosis and Non-Cystic Fibrosis Individuals
Dana Willner et al.
PLOS ONE (2009)
Phage-Mediated Intergeneric Transfer of Toxin Genes
John Chen et al.
SCIENCE (2009)
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods
Konstantinos Mavromatis et al.
NATURE METHODS (2007)
Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing
Robert Pinard et al.
BMC GENOMICS (2006)
Genomic analysis of uncultured marine viral communities
M Breitbart et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Comprehensive human genome amplification using multiple displacement amplification
FB Dean et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
A virus discovery method incorporating DNase treatment and its application to the identification of two bovine parvovirus species
T Allander et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Lateral gene transfer and the nature of bacterial innovation
H Ochman et al.
NATURE (2000)