4.5 Review

CRISPR interference: a structural perspective

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Structure of a dimeric crenarchaeal Cas6 enzyme with an atypical active site for CRISPR RNA processing

Judith Reeks et al.

BIOCHEMICAL JOURNAL (2013)

Article Biochemistry & Molecular Biology

In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus

Tomas Sinkunas et al.

EMBO JOURNAL (2013)

Article Biochemistry & Molecular Biology

Structure of the Cmr2-Cmr3 Subcomplex of the Cmr RNA Silencing Complex

Yaming Shao et al.

STRUCTURE (2013)

Article Biochemistry & Molecular Biology

Recognition and Cleavage of a Nonstructured CRISPR RNA by Its Processing Endoribonuclease Cas6

Yaming Shao et al.

STRUCTURE (2013)

Article Biochemistry & Molecular Biology

Csy4 relies on an unusual catalytic dyad to position and cleave CRISPR RNA

Rachel E. Haurwitz et al.

EMBO JOURNAL (2012)

Article Biochemistry & Molecular Biology

Nucleic acid binding surface and dimer interface revealed by CRISPR-associated CasB protein structures

Ki Hyun Nam et al.

FEBS LETTERS (2012)

Review Biochemistry & Molecular Biology

Divergence and Convergence in Enzyme Evolution

Michael Y. Galperin et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2012)

Article Biochemistry & Molecular Biology

Crystal Structure of the Largest Subunit of a Bacterial RNA-guided Immune Complex and Its Role in DNA Target Binding

Sabin Mulepati et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2012)

Review Biochemistry & Molecular Biology

Tuning in to Interference: R-Loops and Cascade Complexes in CRISPR Immunity

Ivana Ivancic-Bace et al.

JOURNAL OF MOLECULAR BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral Immunity

Jing Zhang et al.

MOLECULAR CELL (2012)

Article Biochemistry & Molecular Biology

Mechanism of Foreign DNA Selection in a Bacterial Adaptive Immune System

Dipali G. Sashital et al.

MOLECULAR CELL (2012)

Review Multidisciplinary Sciences

RNA-guided genetic silencing systems in bacteria and archaea

Blake Wiedenheft et al.

NATURE (2012)

Article Biochemistry & Molecular Biology

Characterization of CRISPR RNA processing in Clostridium thermocellum and Methanococcus maripaludis

Hagen Richter et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Multidisciplinary Sciences

Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria

Giedrius Gasiunas et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Biochemistry & Molecular Biology

The impact of CRISPR repeat sequence on structures of a Cas6 protein-RNA complex

Ruiying Wang et al.

PROTEIN SCIENCE (2012)

Review Biochemistry & Molecular Biology

The mysterious RAMP proteins and their roles in small RNA-based immunity

Ruiying Wang et al.

PROTEIN SCIENCE (2012)

Editorial Material Biochemistry & Molecular Biology

Cascade-mediated binding and bending of negatively supercoiled DNA

Edze R. Westra et al.

RNA BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Mechanism of substrate selection by a highly specific CRISPR endoribonuclease

Samuel H. Sternberg et al.

Article Biochemistry & Molecular Biology

Cas5d processes pre-crRNA and is a member of a larger family of CRISPR RNA endonucleases

Erin L. Garside et al.

Article Multidisciplinary Sciences

A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity

Martin Jinek et al.

SCIENCE (2012)

Article Biochemistry & Molecular Biology

Structure of the Cmr2 Subunit of the CRISPR-Cas RNA Silencing Complex

Alexis I. Cocozaki et al.

STRUCTURE (2012)

Article Biochemistry & Molecular Biology

Helicase dissociation and annealing of RNA-DNA hybrids by Escherichia coli Cas3 protein

Jamieson A. L. Howard et al.

BIOCHEMICAL JOURNAL (2011)

Article Biochemistry & Molecular Biology

Structure and activity of the Cas3 HD nuclease MJ0384, an effector enzyme of the CRISPR interference

Natalia Beloglazova et al.

EMBO JOURNAL (2011)

Article Biochemistry & Molecular Biology

Cas3 is a single-stranded DNA nuclease and ATP-dependent helicase in the CRISPR/Cas immune system

Tomas Sinkunas et al.

EMBO JOURNAL (2011)

Article Multidisciplinary Sciences

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III

Elitza Deltcheva et al.

NATURE (2011)

Article Multidisciplinary Sciences

Structures of the RNA-guided surveillance complex from a bacterial immune system

Blake Wiedenheft et al.

NATURE (2011)

Review Microbiology

Evolution and classification of the CRISPR-Cas systems

Kira S. Makarova et al.

NATURE REVIEWS MICROBIOLOGY (2011)

Article Biochemistry & Molecular Biology

Recognition and maturation of effector RNAs in a CRISPR interference pathway

Emily M. Gesner et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)

Article Biochemistry & Molecular Biology

An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3

Dipali G. Sashital et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)

Article Biochemistry & Molecular Biology

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

Matthijs M. Jore et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)

Article Multidisciplinary Sciences

Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site

Asma Hatoum-Aslan et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions

Blake Wiedenheft et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence

Ekaterina Semenova et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biochemistry & Molecular Biology

Interaction of the Cas6 Riboendonuclease with CRISPR RNAs: Recognition and Cleavage

Ruiying Wang et al.

STRUCTURE (2011)

Review Microbiology

CRISPR/Cas System and Its Role in Phage-Bacteria Interactions

Helene Deveau et al.

ANNUAL REVIEW OF MICROBIOLOGY, VOL 64, 2010 (2010)

Article Biochemistry & Molecular Biology

Identification and characterization of E-coli CRISPR-cas promoters and their silencing by H-NS

Umit Pul et al.

MOLECULAR MICROBIOLOGY (2010)

Article Multidisciplinary Sciences

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA

Josiane E. Garneau et al.

NATURE (2010)

Article Multidisciplinary Sciences

Self versus non-self discrimination during CRISPR RNA-directed immunity

Luciano A. Marraffini et al.

NATURE (2010)

Review Genetics & Heredity

CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea

Luciano A. Marraffini et al.

NATURE REVIEWS GENETICS (2010)

Article Multidisciplinary Sciences

Sequence- and Structure-Specific RNA Processing by a CRISPR Endonuclease

Rachel E. Haurwitz et al.

SCIENCE (2010)

Review Multidisciplinary Sciences

CRISPR/Cas, the Immune System of Bacteria and Archaea

Philippe Horvath et al.

SCIENCE (2010)

Article Biochemistry & Molecular Biology

RNA-Guided RNA Cleavage by a CRISPR RNA-Cas Protein Complex

Caryn R. Hale et al.

Article Biochemistry & Molecular Biology

CRISPR families of the crenarchaeal genus Sulfolobus: bidirectional transcription and dynamic properties

Reidun K. Lillestol et al.

MOLECULAR MICROBIOLOGY (2009)

Article Biochemical Research Methods

Protein structure prediction on the Web: a case study using the Phyre server

Lawrence A. Kelley et al.

NATURE PROTOCOLS (2009)

Article Microbiology

Short motif sequences determine the targets of the prokaryotic CRISPR defence system

F. J. M. Mojica et al.

MICROBIOLOGY-SGM (2009)

Article Biochemistry & Molecular Biology

X-ray crystal structure of a CRISPR-associated RAMP superfamily protein, Cmr5, from Thermus thermophilus HB8

Keiko Sakamoto et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2009)

Review Biochemistry & Molecular Biology

CRISPR-based adaptive and heritable immunity in prokaryotes

John van der Oost et al.

TRENDS IN BIOCHEMICAL SCIENCES (2009)

Review Biochemistry & Molecular Biology

RNA-splicing endonuclease structure and function

K. Calvin et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2008)

Review Biochemistry & Molecular Biology

RNA recognition motifs:: boring?: Not quite

Antoine Clery et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2008)

Article Biochemistry & Molecular Biology

X-ray crystal structure of a CRISPR-associated protein, Cse2, from Thermus thermaphilus HB8

Yoshihiro Agari et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2008)

Article Multidisciplinary Sciences

Small CRISPR RNAs guide antiviral defense in prokaryotes

Stan J. J. Brouns et al.

SCIENCE (2008)

Article Multidisciplinary Sciences

CRISPR Interference Limits Horizontal Gene Transfer in Staphylococci by Targeting DNA

Luciano A. Marraffini et al.

SCIENCE (2008)

Article Microbiology

Phage response to CRISPR-Encoded resistance in Streptococcus thermophilus

Helene Deveau et al.

JOURNAL OF BACTERIOLOGY (2008)

Article Multidisciplinary Sciences

CRISPR provides acquired resistance against viruses in prokaryotes

Rodolphe Barrangou et al.

SCIENCE (2007)

Article Biotechnology & Applied Microbiology

Evolutionary conservation of sequence and secondary structures in CRISPR repeats

Victor Kunin et al.

GENOME BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Origin of asymmetry in adenylyl cyclases:: structures of Mycobacterium tuberculosis Rv1900c

SC Sinha et al.

EMBO JOURNAL (2005)

Article Biochemistry & Molecular Biology

Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

FJM Mojica et al.

JOURNAL OF MOLECULAR EVOLUTION (2005)

Review Biochemistry & Molecular Biology

The origins of RNA catalysis in ribozymes

DMJ Lilley

TRENDS IN BIOCHEMICAL SCIENCES (2003)

Review Cell Biology

The class III adenylyl cyclases: multi-purpose signalling modules

JU Linder et al.

CELLULAR SIGNALLING (2003)

Article Multidisciplinary Sciences

Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus

TH Tang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Biochemistry & Molecular Biology

A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis

KS Makarova et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemistry & Molecular Biology

Identification of genes that are associated with DNA repeats in prokaryotes

R Jansen et al.

MOLECULAR MICROBIOLOGY (2002)