3.8 Article

The determinants of α-amylase pH-activity profiles

Journal

PROTEIN ENGINEERING
Volume 14, Issue 7, Pages 505-512

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/protein/14.7.505

Keywords

alpha-amylase; electrostatics; pH-activity profile; pK(a) calculations; protein dynamics

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The glycosyl hydrolases present a large family of enzymes that are of great significance for industry. Consequently, there is considerable interest in engineering the enzymes in this family for optimal performance under a range of very diverse conditions. Until recently, tailoring glycosyl hydrolases for specific industrial processes mainly involved stability engineering, but lately there has also been considerable interest in engineering their pH-activity profiles. We mutated four neutral residues (N190, F290, N326 and Q360) in the chimeric Bacillus Ba2 alpha -amylase to both charged and neutral amino acids. The results show that the pH-activity profile of the Ba2 alpha -amylase can be changed by inserting charged residues close to the active site. The changes in the pH-activity profile for these neutral --> charged mutations do not, however, correlate with the predictions from calculations of the pK(a) values of the active site residues. More surprisingly, the neutral --> neutral mutations change the pH-activity profile as much as the neutral --> charged mutations. From these results, it is concluded that factors other than electrostatics, presumably the dynamic aspects of the active site, are important for the shape of the pH-activity profiles of the alpha -amylases.

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