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APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
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AUTOPHAGY (2010)
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Javier Calvo-Garrido et al.
AUTOPHAGY (2010)
Elevated Beclin 1 expression is correlated with HIF-1 alpha in predicting poor prognosis of nasopharyngeal carcinoma
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AUTOPHAGY (2010)
Determining Atg protein stoichiometry at the phagophore assembly site by fluorescence microscopy
Jiefei Geng et al.
AUTOPHAGY (2010)
Larval midgut destruction in Drosophila Not dependent on caspases but suppressed by the loss of autophagy
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AUTOPHAGY (2010)
Artophagy The art of autophagy-Macroautophagy
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AUTOPHAGY (2010)
Reticulocyte mitophagy Monitoring mitochondrial clearance in a mammalian model
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AUTOPHAGY (2010)
Increased expression of ATG genes during nonfeeding periods in the tick Haemaphysalis longicornis
Rika Umemiya-Shirafuji et al.
AUTOPHAGY (2010)
AMPK- and p62/SQSTM1-dependent autophagy mediate resveratrol-induced cell death in chronic myelogenous leukemia
Alexandre Puissant et al.
AUTOPHAGY (2010)
Synthetic substrates for measuring activity of autophagy proteases Autophagins (Atg4)
Chih-Wen Shu et al.
AUTOPHAGY (2010)
Quantitative proteomics for the analysis of spatio-temporal protein dynamics during autophagy
Andrea C. Zimmermann et al.
AUTOPHAGY (2010)
GABARAPL1 (GEC1) associates with autophagic vesicles
Fatima Zahra Chakrama et al.
AUTOPHAGY (2010)
Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteins
Eisuke Itakura et al.
AUTOPHAGY (2010)
Autophagy and its physiological relevance in arthropods Current knowledge and perspectives
Davide Malagoli et al.
AUTOPHAGY (2010)
A reporter cell system to monitor autophagy based on p62/SQSTM1
Kenneth Bowitz Larsen et al.
AUTOPHAGY (2010)
Electron tomography reveals the endoplasmic reticulum as a membrane source for autophagosome formation
Mitsuko Hayashi-Nishino et al.
AUTOPHAGY (2010)
The in vitro cleavage of the hAtg proteins by cell death proteases
Joanna M. Norman et al.
AUTOPHAGY (2010)
Quantitation of autophagic flux in mature skeletal muscle
Jeong-Sun Ju et al.
AUTOPHAGY (2010)
The autophagosomal protein LGG-2 acts synergistically with LGG-1 in dauer formation and longevity in C. elegans
Adriana Alberti et al.
AUTOPHAGY (2010)
Beclin 1 expression A predictor of prognosis in patients with extranodal natural killer T-cell lymphoma, nasal type
Jia-Jia Huang et al.
AUTOPHAGY (2010)
Evidence for the interplay between JNK and p53-DRAM signalling pathways in the regulation of autophagy
Severine Lorin et al.
AUTOPHAGY (2010)
Autophagy dysfunction and ubiquitin-positive protein aggregates in Dictyostelium cells lacking Vmp1
Javier Calvo-Garrido et al.
AUTOPHAGY (2010)
Methods to monitor autophagy in H. pylori vacuolating cytotoxin A (VacA)-treated cells
Deepa Raju et al.
AUTOPHAGY (2010)
Gigantic macroautophagy in programmed nuclear death of Tetrahymena thermophila
Takahiko Akematsu et al.
AUTOPHAGY (2010)
Investigating autophagy Quantitative morphometric analysis using electron microscopy
Jamie M. Swanlund et al.
AUTOPHAGY (2010)
A comprehensive glossary of autophagy-related molecules and processes
Daniel J. Klionsky et al.
AUTOPHAGY (2010)
Quantification of nonselective bulk autophagy in S. cerevisiae using Pgk1-GFP
Evelyn Welter et al.
AUTOPHAGY (2010)
A novel quantitative flow cytometry-based assay for autophagy
Kai Er Eng et al.
AUTOPHAGY (2010)
Mammalian Atg18 (WIPI2) localizes to omegasome-anchored phagophores and positively regulates LC3 lipidation
Hannah E. J. Polson et al.
AUTOPHAGY (2010)
The PINK1/Parkin-mediated mitophagy is compromised by PD-associated mutations
Sven Geisler et al.
AUTOPHAGY (2010)
microRNA-dependent modulation of histone acetylation in Waldenstrom macroglobulinemia
Aldo M. Roccaro et al.
BLOOD (2010)
Acetylated microtubules are required for fusion of autophagosomes with lysosomes
Rui Xie et al.
BMC CELL BIOLOGY (2010)
Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches
Mohamed Salem et al.
BMC GENOMICS (2010)
Adaptation of Hansenula polymorpha to methanol: a transcriptome analysis
Tim van Zutphen et al.
BMC GENOMICS (2010)
Beclin 1 over- and underexpression in colorectal cancer: distinct patterns relate to prognosis and tumour hypoxia
M. I. Koukourakis et al.
BRITISH JOURNAL OF CANCER (2010)
AZD8055 Is a Potent, Selective, and Orally Bioavailable ATP-Competitive Mammalian Target of Rapamycin Kinase Inhibitor with In vitro and In vivo Antitumor Activity
Christine M. Chresta et al.
CANCER RESEARCH (2010)
C. elegans Screen Identifies Autophagy Genes Specific to Multicellular Organisms
Ye Tian et al.
CELL (2010)
Lysosomal Proteolysis and Autophagy Require Presenilin 1 and Are Disrupted by Alzheimer-Related PS1 Mutations
Ju-Hyun Lee et al.
CELL (2010)
Essential Regulation of Cell Bioenergetics by Constitutive InsP3 Receptor Ca2+ Transfer to Mitochondria
Cesar Cardenas et al.
CELL (2010)
Methods in Mammalian Autophagy Research
Noboru Mizushima et al.
CELL (2010)
Modes of cell death in the pupal perivisceral fat body tissue of the silkworm Bombyx mori L.
Purushothaman Sumithra et al.
CELL AND TISSUE RESEARCH (2010)
The Parkinson-associated protein PINK1 interacts with Beclin1 and promotes autophagy
S. Michiorri et al.
CELL DEATH AND DIFFERENTIATION (2010)
Coronaviruses Hijack the LC3-I-Positive EDEMosomes, ER-Derived Vesicles Exporting Short-Lived ERAD Regulators, for Replication
Fulvio Reggiori et al.
CELL HOST & MICROBE (2010)
Defective Hepatic Autophagy in Obesity Promotes ER Stress and Causes Insulin Resistance
Ling Yang et al.
CELL METABOLISM (2010)
Loss of Dictyostelium ATG9 results in a pleiotropic phenotype affecting growth, development, phagocytosis and clearance and replication of Legionella pneumophila
Sze Man Tung et al.
CELLULAR MICROBIOLOGY (2010)
Autophagosomes can support Yersinia pseudotuberculosis replication in macrophages
Kevin Moreau et al.
CELLULAR MICROBIOLOGY (2010)
Autophagy supports Candida glabrata survival during phagocytosis
Andreas Roetzer et al.
CELLULAR MICROBIOLOGY (2010)
AMPK-independent induction of autophagy by cytosolic Ca2+ increase
Antje Grotemeier et al.
CELLULAR SIGNALLING (2010)
Profound Cardioprotection With Chloramphenicol Succinate in the Swine Model of Myocardial Ischemia-Reperfusion Injury
Javier A. Sala-Mercado et al.
CIRCULATION (2010)
An in vivo and in vitro assessment of autophagy-related gene expression in muscle of rainbow trout (Oncorhynchus mykiss)
Iban Seiliez et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY (2010)
Chaperone-Assisted Selective Autophagy Is Essential for Muscle Maintenance
Verena Arndt et al.
CURRENT BIOLOGY (2010)
Mammalian autophagy: core molecular machinery and signaling regulation
Zhifen Yang et al.
CURRENT OPINION IN CELL BIOLOGY (2010)
LC3 and GATE-16/GABARAP subfamilies are both essential yet act differently in autophagosome biogenesis
Hilla Weidberg et al.
EMBO JOURNAL (2010)
Nix is a selective autophagy receptor for mitochondrial clearance
Ivana Novak et al.
EMBO REPORTS (2010)
Regulation of the autophagic machinery in human neutrophils
Ioannis Mitroulis et al.
EUROPEAN JOURNAL OF IMMUNOLOGY (2010)
Identification of a novel serine/threonine kinase ULK3 as a positive regulator of Hedgehog pathway
Alla Maloverjan et al.
EXPERIMENTAL CELL RESEARCH (2010)
Role of autophagy in Caenorhabditis elegans
Attila Lajos Kovacs et al.
FEBS LETTERS (2010)
The Cvt pathway as a model for selective autophagy
Melinda A. Lynch-Day et al.
FEBS LETTERS (2010)
Autophagy Reduces Acute Ethanol-Induced Hepatotoxicity and Steatosis in Mice
Wen-Xing Ding et al.
GASTROENTEROLOGY (2010)
Autophosphorylation Within the Atg1 Activation Loop Is Required for Both Kinase Activity and the Induction of Autophagy in Saccharomyces cerevisiae
Yuh-Ying Yeh et al.
GENETICS (2010)
Zebrafish MTMR14 is required for excitation-contraction coupling, developmental motor function and the regulation of autophagy
J. J. Dowling et al.
HUMAN MOLECULAR GENETICS (2010)
In Vivo Requirement for Atg5 in Antigen Presentation by Dendritic Cells
Heung Kyu Lee et al.
IMMUNITY (2010)
Two Tor genes in the silkworm Bombyx mori
S. Zhou et al.
INSECT MOLECULAR BIOLOGY (2010)
The Vacuole Import and Degradation Pathway Utilizes Early Steps of Endocytosis and Actin Polymerization to Deliver Cargo Proteins to the Vacuole for Degradation
C. Randell Brown et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Biochemical Isolation and Characterization of the Tubulovesicular LC3-positive Autophagosomal Compartment
Wentao Gao et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
AMP-activated Protein Kinase Signaling Activation by Resveratrol Modulates Amyloid-β Peptide Metabolism
Valerie Vingtdeux et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
LC3-dependent Intracellular Membrane Tubules Induced by γ-Protocadherins A3 and B2 A ROLE FOR INTRALUMINAL INTERACTIONS
Hugo H. Hanson et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Dual Role of 3-Methyladenine in Modulation of Autophagy via Different Temporal Patterns of Inhibition on Class I and III Phosphoinositide 3-Kinase
You-Tong Wu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
The TOR Complex 1 Is Distributed in Endosomes and in Retrograde Vesicles That Form from the Vacuole Membrane and Plays an Important Role in the Vacuole Import and Degradation Pathway
C. Randell Brown et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
p62/SQSTM1 Is a Target Gene for Transcription Factor NRF2 and Creates a Positive Feedback Loop by Inducing Antioxidant Response Element-driven Gene Transcription
Ashish Jain et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
The Antioxidant Transcription Factor Nrf2 Negatively Regulates Autophagy and Growth Arrest Induced by the Anticancer Redox Agent Mitoquinone
V. Ashutosh Rao et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Proteasome and p97 mediate mitophagy and degradation of mitofusins induced by Parkin
Atsushi Tanaka et al.
JOURNAL OF CELL BIOLOGY (2010)
Disease-causing mutations in Parkin impair mitochondrial ubiquitination, aggregation, and HDAC6-dependent mitophagy
Joo-Yong Lee et al.
JOURNAL OF CELL BIOLOGY (2010)
Regulation of the autophagy protein LC3 by phosphorylation
Salvatore J. Cherra et al.
JOURNAL OF CELL BIOLOGY (2010)
A yeast MAPK cascade regulates pexophagy but not other autophagy pathways
Ravi Manjithaya et al.
JOURNAL OF CELL BIOLOGY (2010)
Autophagic degradation of dBruce controls DNA fragmentation in nurse cells during late Drosophila melanogaster oogenesis
Ioannis P. Nezis et al.
JOURNAL OF CELL BIOLOGY (2010)
The dynamic interaction of AMBRA1 with the dynein motor complex regulates mammalian autophagy
Sabrina Di Bartolomeo et al.
JOURNAL OF CELL BIOLOGY (2010)
An Atg9-containing compartment that functions in the early steps of autophagosome biogenesis
Muriel Mari et al.
JOURNAL OF CELL BIOLOGY (2010)
Endogenous HMGB1 regulates autophagy
Daolin Tang et al.
JOURNAL OF CELL BIOLOGY (2010)
Autophagy requires endoplasmic reticulum targeting of the PI3-kinase complex via Atg14L
Kohichi Matsunaga et al.
JOURNAL OF CELL BIOLOGY (2010)
Atg8 regulates vacuolar membrane dynamics in a lipidation-independent manner in Pichia pastoris
Naoki Tamura et al.
JOURNAL OF CELL SCIENCE (2010)
The unfolded protein response protects human tumor cells during hypoxia through regulation of the autophagy genes MAP1LC3B and ATG5
Kasper M. A. Rouschop et al.
JOURNAL OF CLINICAL INVESTIGATION (2010)
Autophagy influences glomerular disease susceptibility and maintains podocyte homeostasis in aging mice
Bjoern Hartleben et al.
JOURNAL OF CLINICAL INVESTIGATION (2010)
Prognostic relevance of light chain 3 (LC3A) autophagy patterns in colorectal adenocarcinomas
Alexandra Giatromanolaki et al.
JOURNAL OF CLINICAL PATHOLOGY (2010)
Atg9A Protein, an Autophagy-related Membrane Protein, Is Localized in the Neurons of Mouse Brains
Hirosumi Tamura et al.
JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY (2010)
A functional analysis of GABARAP on 17p13.1 by knockdown zebrafish
Yuta Komoike et al.
JOURNAL OF HUMAN GENETICS (2010)
Density functional computational studies on (E)-2-[(2-Hydroxy-5-nitrophenyl)-iminiomethyl]-4-nitrophenolate
Hasan Tanak et al.
JOURNAL OF MOLECULAR MODELING (2010)
Pathogenic Lysosomal Depletion in Parkinson's Disease
Benjamin Dehay et al.
JOURNAL OF NEUROSCIENCE (2010)
Autophagy-active beclin-1 correlates with favourable clinical outcome in non-Hodgkin lymphomas
Giuseppina Nicotra et al.
MODERN PATHOLOGY (2010)
Structure of the Human mTOR Complex I and Its Implications for Rapamycin Inhibition
Calvin K. Yip et al.
MOLECULAR CELL (2010)
The molecular mechanism of mitochondria autophagy in yeast
Tomotake Kanki et al.
MOLECULAR MICROBIOLOGY (2010)
The autophagy genes atg8 and atg1 affect morphogenesis and pathogenicity in Ustilago maydis
Marina Nadal et al.
MOLECULAR PLANT PATHOLOGY (2010)
C60(Nd) nanoparticles enhance chemotherapeutic susceptibility of cancer cells by modulation of autophagy
Pengfei Wei et al.
NANOTECHNOLOGY (2010)
Network organization of the human autophagy system
Christian Behrends et al.
NATURE (2010)
Termination of autophagy and reformation of lysosomes regulated by mTOR
Li Yu et al.
NATURE (2010)
Autophagy in mammalian development and differentiation
Noboru Mizushima et al.
NATURE CELL BIOLOGY (2010)
Plasma membrane contributes to the formation of pre-autophagosomal structures
Brinda Ravikumar et al.
NATURE CELL BIOLOGY (2010)
PINK1/Parkin-mediated mitophagy is dependent on VDAC1 and p62/SQSTM1
Sven Geisler et al.
NATURE CELL BIOLOGY (2010)
Autophagy is defective in collagen VI muscular dystrophies, and its reactivation rescues myofiber degeneration
Paolo Grumati et al.
NATURE MEDICINE (2010)
Wild-type and mutant SOD1 share an aberrant conformation and a common pathogenic pathway in ALS
Daryl A. Bosco et al.
NATURE NEUROSCIENCE (2010)
Trehalose ameliorates dopaminergic and tau pathology in parkin deleted/tau overexpressing mice through autophagy activation
Jose A. Rodriguez-Navarro et al.
NEUROBIOLOGY OF DISEASE (2010)
Snapin-Regulated Late Endosomal Transport Is Critical for Efficient Autophagy-Lysosomal Function in Neurons
Qian Cai et al.
NEURON (2010)
Fluorescent Proteins and Their Applications in Imaging Living Cells and Tissues
Dmitriy M. Chudakov et al.
PHYSIOLOGICAL REVIEWS (2010)
ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A AND ATG12B loci
Taijoon Chung et al.
PLANT JOURNAL (2010)
Inhibition of Target of Rapamycin Signaling and Stress Activate Autophagy in Chlamydomonas reinhardtii
Maria Esther Perez-Perez et al.
PLANT PHYSIOLOGY (2010)
Automated High-Content Live Animal Drug Screening Using C-elegans Expressing the Aggregation Prone Serpin α1-antitrypsin Z
Sager J. Gosai et al.
PLOS ONE (2010)
A small-molecule scaffold induces autophagy in primary neurons and protects against toxicity in a Huntington disease model
Andrey S. Tsvetkov et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Akt and Autophagy Cooperate to Promote Survival of Drug-Resistant Glioma
Qi-Wen Fan et al.
SCIENCE SIGNALING (2010)
Ammonia Derived from Glutaminolysis Is a Diffusible Regulator of Autophagy
Christina H. Eng et al.
SCIENCE SIGNALING (2010)
Autophagy Regulates the Post-Translational Cleavage of BCL-2 and Promotes Neuronal Survival
Laura Lossi et al.
THESCIENTIFICWORLDJOURNAL (2010)
Inhibition of PI3k Class III-Dependent Autophagy Prevents Apoptosis and Necrosis by Oxidative Stress in Dopaminergic Neuroblastoma Cells
Roberta Castino et al.
TOXICOLOGICAL SCIENCES (2010)
The Beclin 1-VPS34 complex - at the crossroads of autophagy and beyond
Sarah F. Funderburk et al.
TRENDS IN CELL BIOLOGY (2010)
Caloric restriction and resveratrol promote longevity through the Sirtuin-1-dependent induction of autophagy
E. Morselli et al.
CELL DEATH & DISEASE (2010)
p62/SQSTM1 is overexpressed and prominently accumulated in inclusions of sporadic inclusion-body myositis muscle fibers, and can help differentiating it from polymyositis and dermatomyositis
Anna Nogalska et al.
ACTA NEUROPATHOLOGICA (2009)
Increased Activity and Altered Subcellular Distribution of Lysosomal Enzymes Determine Neuronal Vulnerability in Niemann-Pick Type C1-Deficient Mice
Asha Amritraj et al.
AMERICAN JOURNAL OF PATHOLOGY (2009)
Super-Resolution Fluorescence Microscopy
Bo Huang et al.
ANNUAL REVIEW OF BIOCHEMISTRY (2009)
Genome-Wide Identification of Saccharomyces cerevisiae Genes Required for Maximal Tolerance to Ethanol
Miguel C. Teixeira et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Radiation-induced autophagy in normal and cancer cells Towards novel cytoprotection and radio-sensitization policies?
Christos E. Zois et al.
AUTOPHAGY (2009)
Prognostic significance of Beclin 1-dependent apoptotic activity in hepatocellular carcinoma
Ying-Hong Shi et al.
AUTOPHAGY (2009)
Autophagy is not universally required for phosphatidyl-serine exposure and apoptotic cell engulfment during neural development
Maria A. Mellen et al.
AUTOPHAGY (2009)
An executioner caspase regulates autophagy
Y. C. Claire Hou et al.
AUTOPHAGY (2009)
Quantitation of selective autophagic protein aggregate degradation in vitro and in vivo using luciferase reporters
Jeong-Sun Ju et al.
AUTOPHAGY (2009)
Dual roles for autophagy during follicular atresia in fish ovary
Ralph G. Thome et al.
AUTOPHAGY (2009)
Autophagy as the main means of cytotoxicity by glucocorticoids in hematological malignancies
Dan Grander et al.
AUTOPHAGY (2009)
Methodological considerations for assessing autophagy modulators A study with calcium phosphate precipitates
Sovan Sarkar et al.
AUTOPHAGY (2009)
Characterization of unusual families of ATG8-like proteins and ATG12 in the protozoan parasite Leishmania major
Roderick A. M. Williams et al.
AUTOPHAGY (2009)
Measuring piecemeal microautophagy of the nucleus in Saccharomyces cerevisiae
Jonathan I. Millen et al.
AUTOPHAGY (2009)
Autophagy is an important event for megakaryocytic differentiation of the chronic myelogenous leukemia K562 cell line
Pascal Colosetti et al.
AUTOPHAGY (2009)
Identification of novel autophagy regulators by a luciferase-based assay for the kinetics of autophagic flux
Thomas Farkas et al.
AUTOPHAGY (2009)
Monitoring mitophagy in yeast The Om45-GFP processing assay
Tomotake Kanki et al.
AUTOPHAGY (2009)
The prognostic role of Beclin 1 protein expression in high-grade gliomas
Luigi Pirtoli et al.
AUTOPHAGY (2009)
Regulation of autophagy by a beclin 1-targeted microRNA, miR-30a, in cancer cells
Hua Zhu et al.
AUTOPHAGY (2009)
Evolution of Atg1 function and regulation
Edmond Y. Chan et al.
AUTOPHAGY (2009)
Piecemeal microautophagy of the nucleus Genetic and morphological traits
Roswitha Krick et al.
AUTOPHAGY (2009)
The expression of beclin 1 is associated with favorable prognosis in stage IIIB colon cancers
Bao-Xiu Li et al.
AUTOPHAGY (2009)
In search of an autophagomometer
David C. Rubinsztein et al.
AUTOPHAGY (2009)
Assaying autophagic activity in transgenic GFP-Lc3 and GFP-Gabarap zebrafish embryos
Congcong He et al.
AUTOPHAGY (2009)
3D tomography reveals connections between the phagophore and endoplasmic reticulum
Päivi Ylä-Anttila et al.
Autophagy (2009)
Basal autophagy induction without AMP-activated protein kinase under low glucose conditions
Tyisha Williams et al.
AUTOPHAGY (2009)
The MAP1-LC3 conjugation system is involved in lipid droplet formation
Masahiro Shibata et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2009)
Inhibition of macroautophagy by bafilomycin A1 lowers proliferation and induces apoptosis in colon cancer cells
Ya Chun Wu et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2009)
Ku-0063794 is a specific inhibitor of the mammalian target of rapamycin (mTOR)
Juan M. Garcia-Martinez et al.
BIOCHEMICAL JOURNAL (2009)
Autophagy in Hydra: A response to starvation and stress in early animal evolution
Simona Chera et al.
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2009)
Autophagic cell death: Analysis in Dictyostelium
Corinne Giusti et al.
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2009)
Systematic cloning and analysis of autophagy-related genes from the silkworm Bombyx mori
Xuan Zhang et al.
BMC MOLECULAR BIOLOGY (2009)
Targeted Activation of Innate Immunity for Therapeutic Induction of Autophagy and Apoptosis in Melanoma Cells
Damia Tormo et al.
CANCER CELL (2009)
Biochemical, Cellular, and In vivo Activity of Novel ATP-Competitive and Selective Inhibitors of the Mammalian Target of Rapamycin
Ker Yu et al.
CANCER RESEARCH (2009)
SEPA-1 Mediates the Specific Recognition and Degradation of P Granule Components by Autophagy in C. elegans
Yuxia Zhang et al.
CELL (2009)
Bidirectional Transport of Amino Acids Regulates mTOR and Autophagy
Paul Nicklin et al.
CELL (2009)
p62 at the Crossroads of Autophagy, Apoptosis, and Cancer
Jorge Moscat et al.
CELL (2009)
Ligands of the antiestrogen-binding site induce active cell death and autophagy in human breast cancer cells through the modulation of cholesterol metabolism
P. de Medina et al.
CELL DEATH AND DIFFERENTIATION (2009)
p38α blockade inhibits colorectal cancer growth in vivo by inducing a switch from HIF1α- to FoxO-dependent transcription
F. Chiacchiera et al.
CELL DEATH AND DIFFERENTIATION (2009)
The inositol 1,4,5-trisphosphate receptor regulates autophagy through its interaction with Beclin 1
J. M. Vicencio et al.
CELL DEATH AND DIFFERENTIATION (2009)
Guidelines for the use and interpretation of assays for monitoring cell death in higher eukaryotes
L. Galluzzi et al.
CELL DEATH AND DIFFERENTIATION (2009)
Shigella Phagocytic Vacuolar Membrane Remnants Participate in the Cellular Response to Pathogen Invasion and Are Regulated by Autophagy
Nicolas Dupont et al.
CELL HOST & MICROBE (2009)
Matrix Protein 2 of Influenza A Virus Blocks Autophagosome Fusion with Lysosomes
Monique Gannage et al.
CELL HOST & MICROBE (2009)
Autophagy Is Required to Maintain Muscle Mass
Eva Masiero et al.
CELL METABOLISM (2009)
Autophagy, Not Apoptosis, Is Essential for Midgut Cell Death in Drosophila
Donna Denton et al.
CURRENT BIOLOGY (2009)
Turnover of organelles by autophagy in yeast
Jean-Claude Farre et al.
CURRENT OPINION IN CELL BIOLOGY (2009)
Atg32 Is a Mitochondrial Protein that Confers Selectivity during Mitophagy
Tomotake Kanki et al.
DEVELOPMENTAL CELL (2009)
Mitochondria-Anchored Receptor Atg32 Mediates Degradation of Mitochondria via Selective Autophagy
Koji Okamoto et al.
DEVELOPMENTAL CELL (2009)
Posttranslational Regulation of BCL2 Levels in Cerebellar Granule Cells: A Mechanism of Neuronal Survival
Laura Lossi et al.
DEVELOPMENTAL NEUROBIOLOGY (2009)
Quantifying Western blots: Pitfalls of densitometry
Max Gassmann et al.
ELECTROPHORESIS (2009)
DAP-kinase-mediated phosphorylation on the BH3 domain of beclin 1 promotes dissociation of beclin 1 from Bcl-XL and induction of autophagy
Einat Zalckvar et al.
EMBO REPORTS (2009)
IGF-I, EGF, and sex steroids regulate autophagy in bovine mammary epithelial cells via the mTOR pathway
Agnieszka Sobolewska et al.
EUROPEAN JOURNAL OF CELL BIOLOGY (2009)
Comprehensive phenotypic analysis for identification of genes affecting growth under ethanol stress in Saccharomyces cerevisiae
Katsunori Yoshikawa et al.
FEMS YEAST RESEARCH (2009)
SmATG7 is required for viability in the homothallic ascomycete Sordaria macrospora
Nicole Nolting et al.
FUNGAL GENETICS AND BIOLOGY (2009)
Autophagy in filamentous fungi
Judith K. Pollack et al.
FUNGAL GENETICS AND BIOLOGY (2009)
Autophagy mediates the mitotic senescence transition
Andrew R. J. Young et al.
GENES & DEVELOPMENT (2009)
Lag-phase autophagy in the methylotrophic yeast Pichia pastoris
Shun-ichi Yamashita et al.
GENES TO CELLS (2009)
Autophagy Is an Essential Component of Drosophila Immunity against Vesicular Stomatitis Virus
Spencer Shelly et al.
IMMUNITY (2009)
Toll-like receptor signaling in the lysosomal pathways
Miguel A. Sanjuan et al.
IMMUNOLOGICAL REVIEWS (2009)
HAMLET (human α-lactalbumin made lethal to tumor cells) triggers autophagic tumor cell death
Sonja Aits et al.
INTERNATIONAL JOURNAL OF CANCER (2009)
Hepatic Autophagy Is Suppressed in the Presence of Insulin Resistance and Hyperinsulinemia INHIBITION OF FoxO1-DEPENDENT EXPRESSION OF KEY AUTOPHAGY GENES BY INSULIN
Hui-Yu Liu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2009)
Aup1-mediated Regulation of Rtg3 during Mitophagy
Dikla Journo et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2009)
An ATP-competitive Mammalian Target of Rapamycin Inhibitor Reveals Rapamycin-resistant Functions of mTORC1
Carson C. Thoreen et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2009)
Coordination of membrane events during autophagy by multiple class III PI3-kinase complexes
Anne Simonsen et al.
JOURNAL OF CELL BIOLOGY (2009)
Autophagy pathway intersects with HIV-1 biosynthesis and regulates viral yields in macrophages
George B. Kyei et al.
JOURNAL OF CELL BIOLOGY (2009)
Crosstalk between Hsp70 molecular chaperone, lysosomes and proteasomes in autophagy-mediated proteolysis in human retinal pigment epithelial cells
Tuomas Ryhanen et al.
JOURNAL OF CELLULAR AND MOLECULAR MEDICINE (2009)
Activation of HIF-1 alpha in Exponentially Growing Cells Via Hypoxic Stimulation Is Independent of the Akt/mTOR Pathway
Frederic Dayan et al.
JOURNAL OF CELLULAR PHYSIOLOGY (2009)
The Adaptor Protein p62/SQSTM1 Targets Invading Bacteria to the Autophagy Pathway
Yiyu T. Zheng et al.
JOURNAL OF IMMUNOLOGY (2009)
Unc-51 Controls Active Zone Density and Protein Composition by Downregulating ERK Signaling
Yogesh P. Wairkar et al.
JOURNAL OF NEUROSCIENCE (2009)
Interaction of ICP34.5 with Beclin 1 Modulates Herpes Simplex Virus Type 1 Pathogenesis through Control of CD4+ T-Cell Responses
David A. Leib et al.
JOURNAL OF VIROLOGY (2009)
Kinase-Inactivated ULK Proteins Inhibit Autophagy via Their Conserved C- Terminal Domains Using an Atg13-Independent Mechanism
Edmond Y. W. Chan et al.
MOLECULAR AND CELLULAR BIOLOGY (2009)
Hypoxia-Induced Autophagy Is Mediated through Hypoxia-Inducible Factor Induction of BNIP3 and BNIP3L via Their BH3 Domains
Gregory Bellot et al.
MOLECULAR AND CELLULAR BIOLOGY (2009)
A Genomic Screen for Yeast Mutants Defective in Selective Mitochondria Autophagy
Tomotake Kanki et al.
MOLECULAR BIOLOGY OF THE CELL (2009)
Nutrient-dependent mTORC1 Association with the ULK1-Atg13-FIP200 Complex Required for Autophagy
Nao Hosokawa et al.
MOLECULAR BIOLOGY OF THE CELL (2009)
An Atg1/Atg13 Complex with Multiple Roles in TOR-mediated Autophagy Regulation
Yu-Yun Chang et al.
MOLECULAR BIOLOGY OF THE CELL (2009)
ULK-Atg13-FIP200 Complexes Mediate mTOR Signaling to the Autophagy Machinery
Chang Hwa Jung et al.
MOLECULAR BIOLOGY OF THE CELL (2009)
NVP-BEZ235, a novel dual phosphatidylinositol 3-kinase/mammalian target of rapamycin inhibitor, elicits multifaceted antitumor activities in human gliomas
Ta-Jen Liu et al.
MOLECULAR CANCER THERAPEUTICS (2009)
A Role for NBR1 in Autophagosomal Degradation of Ubiquitinated Substrates
Vladimir Kirkin et al.
MOLECULAR CELL (2009)
Discovery of Atg5/Atg7-independent alternative macroautophagy
Yuya Nishida et al.
NATURE (2009)
Autophagy regulates lipid metabolism
Rajat Singh et al.
NATURE (2009)
FLIP-mediated autophagy regulation in cell death control
Jong-Soo Lee et al.
NATURE CELL BIOLOGY (2009)
Induction of autophagy by spermidine promotes longevity
Tobias Eisenberg et al.
NATURE CELL BIOLOGY (2009)
Distinct regulation of autophagic activity by Atg14L and Rubicon associated with Beclin 1-phosphatidylinositol-3-kinase complex
Yun Zhong et al.
NATURE CELL BIOLOGY (2009)
Two Beclin 1-binding proteins, Atg14L and Rubicon, reciprocally regulate autophagy at different stages
Kohichi Matsunaga et al.
NATURE CELL BIOLOGY (2009)
Autophagy enhances the presentation of endogenous viral antigens on MHC class I molecules during HSV-1 infection
Luc English et al.
NATURE IMMUNOLOGY (2009)
The TBK1 adaptor and autophagy receptor NDP52 restricts the proliferation of ubiquitin-coated bacteria
Teresa L. M. Thurston et al.
NATURE IMMUNOLOGY (2009)
SUnSET, a nonradioactive method to monitor protein synthesis
Enrico K. Schmidt et al.
NATURE METHODS (2009)
Atg26-Mediated Pexophagy Is Required for Host Invasion by the Plant Pathogenic Fungus Colletotrichum orbiculare
Makoto Asakura et al.
PLANT CELL (2009)
The ATG Autophagic Conjugation System in Maize: ATG Transcripts and Abundance of the ATG8-Lipid Adduct Are Regulated by Development and Nutrient Availability
Taijoon Chung et al.
PLANT PHYSIOLOGY (2009)
Screen for Chemical Modulators of Autophagy Reveals Novel Therapeutic Inhibitors of mTORC1 Signaling
Aruna D. Balgi et al.
PLOS ONE (2009)
Beclin-1 Expression is a Predictor of Clinical Outcome in Patients with Esophageal Squamous Cell Carcinoma and Correlated to Hypoxia-Inducible Factor (HIF)-1α Expression
Yongshun Chen et al.
PATHOLOGY & ONCOLOGY RESEARCH (2009)
Activation of antibacterial autophagy by NADPH oxidases
Ju Huang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
The autophagy machinery is required to initiate hepatitis C virus replication
Marlene Dreux et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Cell death and proliferation in acute slices and organotypic cultures of mammalian CNS
Laura Lossi et al.
PROGRESS IN NEUROBIOLOGY (2009)
Resveratrol Induces Mitochondrial Alterations, Autophagy and a Cryptobiosis-like State in Scuticociliates
Pedro Morais et al.
PROTIST (2009)
A Gene Network Regulating Lysosomal Biogenesis and Function
Marco Sardiello et al.
SCIENCE (2009)
Peroxisome Dynamics in Cultured Mammalian Cells
Sofie J. Huybrechts et al.
TRAFFIC (2009)
Active-Site Inhibitors of mTOR Target Rapamycin-Resistant Outputs of mTORC1 and mTORC2
Morris E. Feldman et al.
PLOS BIOLOGY (2009)
Atg5-Independent Sequestration of Ubiquitinated Mycobacteria
Cathleen A. Collins et al.
PLOS PATHOGENS (2009)
MONITORING AUTOPHAGY BY ELECTRON MICROSCOPY IN MAMMALIAN CELLS
Paivi Yla-Anttila et al.
METHODS IN ENZYMOLOGY: AUTOPHAGY IN MAMMALIAN SYSTEMS, VOL 452, PT B (2009)
CORRELATIVE LIGHT AND ELECTRON MICROSCOPY
Minoo Razi et al.
METHODS IN ENZYMOLOGY: AUTOPHAGY IN MAMMALIAN SYSTEMS, VOL 452, PT B (2009)
Inhibition of autophagy prevents hippocampal pyramidal neuron death after hypoxic-ischemic injury
Masato Koike et al.
AMERICAN JOURNAL OF PATHOLOGY (2008)
An in vivo and in vitro assessment of TOR signaling cascade in rainbow trout (Oncorhynchus mykiss)
Iban Seiliez et al.
AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY (2008)
The plant alkaloid voacamine induces apoptosis-independent autophagic cell death on both sensitive and multidrug resistant human osteosarcoma cells
Stefania Meschini et al.
AUTOPHAGY (2008)
Caffeine induces macroautophagy and confers a cytocidal effect on food spoilage yeast in combination with benzoic acid
Gal Winter et al.
AUTOPHAGY (2008)
Quantitation of autophagy by luciferase release assay
Robin Ketteler et al.
AUTOPHAGY (2008)
Mitochondrially localized ERK2 regulates mitophagy and autophagic cell stress
Ruben K. Dagda et al.
AUTOPHAGY (2008)
A method to measure cardiac autophagic flux in vivo
Eri Iwai-Kanai et al.
AUTOPHAGY (2008)
Different modes of programmed cell death during oogenesis of the silkmoth Bombyx mori
Vicky E. Mpakou et al.
AUTOPHAGY (2008)
Some autophagic and apoptotic features of programmed cell death in the anterior silk glands of the silkworm, Bombyx mori
Ebru Goncu et al.
AUTOPHAGY (2008)
Guidelines for the use and interpretation of assays for monitoring autophagy in higher eukaryotes
Daniel J. Klionsky et al.
AUTOPHAGY (2008)
Macroautophagy-dependent, intralysosomal cleavage of a betaine homocysteine methyltransferase fusion protein requires stable multimerization
Carol A. Mercer et al.
AUTOPHAGY (2008)
Rosella - A fluorescent pH-biosensor for reporting vacuolar turnover of cytosol and organelles in yeast
Carlos J. Rosado et al.
AUTOPHAGY (2008)
The autophagy gene ATG5 plays an essential role in B lymphocyte development
Brian C. Miller et al.
AUTOPHAGY (2008)
Utilizing flow cytometry to monitor autophagy in living mammalian cells
Elena Shvets et al.
AUTOPHAGY (2008)
Does bafilomycin A(1) block the fusion of autophagosomes with lysosomes?
Daniel J. Klionsky et al.
AUTOPHAGY (2008)
Anti-cancer agent siramesine is a lysosomotropic detergent that induces cytoprotective autophagosome accumulation
Marie Stampe Ostenfeld et al.
AUTOPHAGY (2008)
To be or not to be? Examples of incorrect identification of autophagic compartments in conventional transmission electron microscopy of mammalian cells
Eeva-Liisa Eskelinen
AUTOPHAGY (2008)
Dual role of JNK1-mediated phosphorylation of Bcl-2 in autophagy and apoptosis regulation
Yongjie Wei et al.
AUTOPHAGY (2008)
Bcl-2 family members - Dual regulators of apoptosis and autophagy
Beth Levine et al.
AUTOPHAGY (2008)
Segregation and rapid turnover of EDEM1 by an autophagy-like mechanism modulates standard ERAD and folding activities
Tito Cali et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2008)
Novel mechanism of elimination of malfunctioning mitochondria (mitoptosis): Formation of mitoptotic bodies and extrusion of mitochondrial material from the cell
Konstantin G. Lyamzaev et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2008)
Differential gene expression of the honey bee Apis mellifera associated with Varroa destructor infection
M. Navajas et al.
BMC GENOMICS (2008)
Macroautophagy inhibition sensitizes tamoxifen-resistant breast cancer cells and enhances mitochondrial depolarization
M. A. Qadir et al.
BREAST CANCER RESEARCH AND TREATMENT (2008)
Diet, autophagy, and cancer: A review
Keith Singletary et al.
CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION (2008)
Mammalian target of rapamycin and S6 kinase 1 positively regulate 6-thioguanine-induced autophagy
Xuehuo Zeng et al.
CANCER RESEARCH (2008)
NVP-BEZ235, a dual PI3K/mTOR inhibitor, prevents PI3K signaling and inhibits the growth of cancer cells with activating PI3K mutations
Violeta Serra et al.
CANCER RESEARCH (2008)
Association of Autophagy Defect with a Malignant Phenotype and Poor Prognosis of Hepatocellular Carcinoma
Zhen-Bin Ding et al.
CANCER RESEARCH (2008)
Blocked autophagy sensitizes resistant carcinoma cells to radiation therapy
Anja Apel et al.
CANCER RESEARCH (2008)
Enhancer of zeste homolog 2 downregulates E-cadherin by mediating histone H3 methylation in gastric cancer cells
Satoshi Fujii et al.
CANCER SCIENCE (2008)
Relationship among follicular apoptosis, integrin β1 and collagen type IV during early ovarian regression in the teleost Prochilodus argenteus after induced spawning
H. B. Santos et al.
CELL AND TISSUE RESEARCH (2008)
The autophagic machinery is necessary for removal of cell corpses from the developing retinal neuroepithelium
M. A. Mellen et al.
CELL DEATH AND DIFFERENTIATION (2008)
Role of non-canonical Beclin 1-independent autophagy in cell death induced by resveratrol in human breast cancer cells
F. Scarlatti et al.
CELL DEATH AND DIFFERENTIATION (2008)
PpAtg30 tags peroxisomes for turnover by selective autophagy
Jean-Claude Farre et al.
DEVELOPMENTAL CELL (2008)
Toll-like receptors control autophagy
Monica A. Delgado et al.
EMBO JOURNAL (2008)
The peroxin Pex14p is involved in LC3-dependent degradation of mammalian peroxisomes
Sayuri Hara-Kuge et al.
EXPERIMENTAL CELL RESEARCH (2008)
Dynamics of the yeast transcriptome during wine fermentation reveals a novel fermentation stress response
Virginia D. Marks et al.
FEMS YEAST RESEARCH (2008)
The ATG12-conjugating enzyme ATG10 is essential for autophagic vesicle formation in Arabidopsis thaliana
Allison R. Phillips et al.
GENETICS (2008)
The vacuolar import and degradation pathway merges with the endocytic pathway to deliver fructose-1,6-bisphosphatase to the vacuole for degradation
C. Randell Brown et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
Aberrant interaction between Parkinson disease-associated mutant UCH-L1 and the lysosomal receptor for chaperone-mediated autophagy
Tomohiro Kabuta et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
Mitophagy in Yeast Occurs through a Selective Mechanism
Tomotake Kanki et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
Structural basis for sorting mechanism of p62 in selective autophagy
Yoshinobu Ichimura et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
Ref(2) P, the Drosophila melanogaster homologue of mammalian p62, is required for the formation of protein aggregates in adult brain
Ioannis P. Nezis et al.
JOURNAL OF CELL BIOLOGY (2008)
Effector caspase Dcp-1 and IAP protein Bruce regulate starvation-induced autophagy during Drosophila melanogaster oogenesis
Ying-Chen Claire Hou et al.
JOURNAL OF CELL BIOLOGY (2008)
Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum
Elizabeth L. Axe et al.
JOURNAL OF CELL BIOLOGY (2008)
Quantitative analysis of autophagy-related protein stoichiometry by fluorescence microscopy
Jiefei Geng et al.
JOURNAL OF CELL BIOLOGY (2008)
Akt inhibition promotes autophagy and sensitizes PTEN-null tumors to lysosomotropic agents
Michael Degtyarev et al.
JOURNAL OF CELL BIOLOGY (2008)
Parkin is recruited selectively to impaired mitochondria and promotes their autophagy
Derek Narendra et al.
JOURNAL OF CELL BIOLOGY (2008)
Suppression of autophagy precipitates neuronal cell death following low doses of methamphetamine
Roberta Castino et al.
JOURNAL OF NEUROCHEMISTRY (2008)
Role of autophagy in G2019S-LRRK2-associated neurite shortening in differentiated SH-SY5Y cells
Edward D. Plowey et al.
JOURNAL OF NEUROCHEMISTRY (2008)
Ordered Organelle Degradation during Starvation-induced Autophagy
Anders Riis Kristensen et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
A Portrait of Tissue Phosphoprotein Stability in the Clinical Tissue Procurement Process
Virginia Espina et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
The chaperone-mediated autophagy receptor organizes in dynamic protein complexes at the lysosomal membrane
Urmi Bandyopadhyay et al.
MOLECULAR AND CELLULAR BIOLOGY (2008)
Atg8 controls phagophore expansion during autophagosome formation
Zhiping Xie et al.
MOLECULAR BIOLOGY OF THE CELL (2008)
Piecemeal Microautophagy of the Nucleus Requires the Core Macroautophagy Genes
R. Krick et al.
MOLECULAR BIOLOGY OF THE CELL (2008)
The Atg1 kinase complex is involved in the regulation of protein recruitment to initiate sequestering vesicle formation for nonspecific autophagy in Saccharomyces cerevisiae
Heesun Cheong et al.
MOLECULAR BIOLOGY OF THE CELL (2008)
An Atg4B Mutant Hampers the Lipidation of LC3 Paralogues and Causes Defects in Autophagosome Closure
Naonobu Fujita et al.
MOLECULAR BIOLOGY OF THE CELL (2008)
Beclin 1 Forms Two Distinct Phosphatidylinositol 3-Kinase Complexes with Mammalian Atg14 and UVRAG
Eisuke Itakura et al.
MOLECULAR BIOLOGY OF THE CELL (2008)
JNK1-mediated phosphorylation of BcI-2 regulates starvation-induced autophagy
Yongjie Wei et al.
MOLECULAR CELL (2008)
AMPK phosphorylation of raptor mediates a metabolic checkpoint
Dana M. Gwinn et al.
MOLECULAR CELL (2008)
Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease
Claudine Kraft et al.
NATURE CELL BIOLOGY (2008)
Novel targets for Huntington's disease in an mTOR-independent autophagy pathway
Andrea Williams et al.
NATURE CHEMICAL BIOLOGY (2008)
5′-triphosphate-siRNA: turning gene silencing and Rig-I activation against melanoma
Hendrik Poeck et al.
NATURE MEDICINE (2008)
Autophagic cell death: the story of a misnomer
Guido Kroemer et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2008)
Rapamycin inhibits trypanosome cell growth by preventing TOR complex 2 formation
Antonio Barquilla et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Identification of Barkor as a mammalian autophagy-specific factor for Beclin 1 and class III phosphatidylinositol 3-kinase
Qiming Sun et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Ovarian follicular atresia is mediated by heterophagy, autophagy, and apoptosis in Prochilodus argenteus and Leporinus taeniatus (Teleostei: Characiformes)
H. B. Santos et al.
THERIOGENOLOGY (2008)
Resveratrol-induced apoptosis depends on the lipid kinase activity of Vps34 and on the formation of autophagolysosomes
Nicol F. Trincheri et al.
CARCINOGENESIS (2008)
Identification of new kinase clusters required for neurite outgrowth and retraction by a loss-of-function RNA interference screen
S. H. Y. Loh et al.
CELL DEATH AND DIFFERENTIATION (2008)
Metabolic adaptations through the PGC-1α and SIRT1 pathways
Joseph T. Rodgers et al.
FEBS LETTERS (2008)
Regulation of translation is required for dendritic cell function and survival during activation
Hugues Lelouard et al.
JOURNAL OF CELL BIOLOGY (2007)
The pancreatitis-induced vacuole membrane protein 1 triggers autophagy in mammalian cells
Alejandro Ropolo et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Toll-like receptor signalling in macrophages links the autophagy pathway to phagocytosis
Miguel A. Sanjuan et al.
NATURE (2007)
Dual-color superresolution imaging of genetically expressed probes within individual adhesion complexes
Hari Shroff et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Growth arrest and autophagy are required for salivary gland cell degradation in Drosophila
Deborah L. Berry et al.
CELL (2007)
Homeostatic levels of p62 control cytoplasmic inclusion body formation in autophagy-deficient mice
Masaaki Komatsu et al.
CELL (2007)
Compound C inhibits hypoxic activation of HIF-1 independent of AMPK
Brooke M. Emerling et al.
FEBS LETTERS (2007)
Unexpected link between metal ion deficiency and autophagy in Aspergillus fumigatus
Daryl L. Richie et al.
EUKARYOTIC CELL (2007)
FoxO3 controls autophagy in skeletal muscle in vivo
Cristina Mammucari et al.
CELL METABOLISM (2007)
Small molecule regulators of autophagy identified by an image-based high-throughput screen
Lihong Zhang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Programmed cell death and stem cell differentiation are responsible for midgut replacement in Heliothis virescens during prepupal instar
Gianluca Tettamanti et al.
CELL AND TISSUE RESEARCH (2007)
Confocal microscopy study of the distribution, content and activity of mitochondria during Paracentrotus lividus development
Giovanni Morici et al.
JOURNAL OF MICROSCOPY (2007)
Integrating traditional electron microscopy, de novo assembly and new results
Attila L. Kovacs et al.
AUTOPHAGY (2007)
Autophagy: from phenomenology to molecular understanding in less than a decade
Daniel J. Klionsky
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)
Cytosolic LC3 ratio as a sensitive index of macroautophagy in isolated rat hepatocytes and H4-II-E cells
Md. Razaul Karim et al.
AUTOPHAGY (2007)
Photoconversion of Lysotracker Red to a green fluorescent molecule
Eric C. Freundt et al.
CELL RESEARCH (2007)
Analysis of the role of autophagy in replication of herpes simplex virus in cell culture
Diane E. Alexander et al.
JOURNAL OF VIROLOGY (2007)
Non-autophagic GFP-LC3 puncta induced by saponin and other detergents
Iwona A. Cieehomska et al.
AUTOPHAGY (2007)
Physiological functions of Atg6/Beclin 1: a unique autophagy-related protein
Yang Cao et al.
CELL RESEARCH (2007)
Essential role for autophagy protein Atg7 in the maintenance of axonal homeostasis and the prevention of axonal degeneration
Masaaki Komatsu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Listeria monocytogenes evades killing by autophagy during colonization of host cells
Cheryl L. Birmingham et al.
AUTOPHAGY (2007)
Dissection of the autophagosome maturation process by a novel reporter protein, tandem fluorescent-tagged LC3
Shunsuke Kimura et al.
AUTOPHAGY (2007)
Regulation of autophagy in bovine mammary epithelial cells
Tomasz Motyl et al.
AUTOPHAGY (2007)
Cloning and characterization of an autophagy-related gene, ATG12, from the three-host tick Haemaphysalis longicornis
Rika Umemiya et al.
INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY (2007)
Factors that affect the type of cell death induced by chemicals
Hiroshi Sakagami et al.
AUTOPHAGY (2007)
SiRNA screening of the kinome identifies ULK1 as a multidomain modulator of autophagy
Edmond Y. W. Chan et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy
Serhiy Pankiv et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Gtdap-1 promotes autophagy and is required for planarian remodeling during regeneration and starvation
Cristina Gonzalez-Estevez et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Linking of autophagy to ubiquitin-proteasome system is important for the regulation of endoplasmic reticulum stress and cell viability
Wen-Xing Ding et al.
AMERICAN JOURNAL OF PATHOLOGY (2007)
Human WIPI-1 puncta-formation: A novel assay to assess mammalian autophagy
Tassula Proikas-Cezanne et al.
FEBS LETTERS (2007)
Cardiac autophagy is a maladaptive response to hemodynamic stress
Hongxin Zhu et al.
JOURNAL OF CLINICAL INVESTIGATION (2007)
The autophagic response to nutrient deprivation in the hl-1 cardiac myocyte is modulated by Bcl-2 and sarco/endoplasmic reticulum calcium stores
Nathan R. Brady et al.
FEBS JOURNAL (2007)
Proteomic analysis of membrane-associated proteins from rat liver autophagosomes
Anders Overbye et al.
AUTOPHAGY (2007)
LC3, an autophagosome marker, can be incorporated into protein aggregates independent of autophagy
Akiko Kuma et al.
AUTOPHAGY (2007)
Generation of cell lines with tetracycline-regulated autophagy and a role for autophagy in controlling cell size
Nao Hosokawa et al.
FEBS LETTERS (2007)
HDAC6 rescues neurodegeneration and provides an essential link between autophagy and the UPS
Udai Bhan Pandey et al.
NATURE (2007)
Sch9 is a major target of TORC1 in Saccharomyces cerevisiae
Jorg Urban et al.
MOLECULAR CELL (2007)
Small molecules enhance autophagy and reduce toxicity in Huntington's disease models
Sovan Sarkar et al.
NATURE CHEMICAL BIOLOGY (2007)
Involvement of a Magnaporthe grisea serine/threonine kinase gene, MgATG1, in appressorium turgor and pathogenesis
Xiao-Hong Liu et al.
EUKARYOTIC CELL (2007)
Gene expression profiling identifies FKBP39 as an inhibitor of autophagy in larval Drosophila fat body
G. Juhasz et al.
CELL DEATH AND DIFFERENTIATION (2007)
Methods for monitoring autophagy from yeast to human
Daniel J. Klionsky et al.
AUTOPHAGY (2007)
Reactive oxygen species are essential for autophagy and specifically regulate the activity of Atg4
Ruth Scherz-Shouval et al.
EMBO JOURNAL (2007)
Unc-51-like kinase 1/2-mediated endocytic processes regulate filopodia extension and branching of sensory axons
Xiang Zhou et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Rapamycin is a neuroprotective treatment for traumatic brain injury
S. Erlich et al.
NEUROBIOLOGY OF DISEASE (2007)
WatershedCounting3D: A new method for segmenting and counting punctate structures from confocal image data
Thomas J. Gniadek et al.
TRAFFIC (2007)
Ubiquitinated-protein aggregates form in pancreatic β-cells during diabetes-induced oxidative stress and are regulated by autophagy
Natalia A. Kaniuk et al.
DIABETES (2007)
Distinct roles of autophagy in the heart during ischemia and reperfusion - Roles of AMP-activated protein kinase and Beclin 1 in mediating autophagy
Yutaka Matsui et al.
CIRCULATION RESEARCH (2007)
Target of rapamycin (TOR) signaling controls epithelial morphogenesis in the vertebrate intestine
Khadijah Makky et al.
DEVELOPMENTAL BIOLOGY (2007)
Two endoplasmic reticulum-associated degradation (ERAD) systems for the novel variant of the mutant dysferlin: ubiquitin/proteasome ERAD(I) and autophagy/lysosome ERAD(II)
Eriko Fujita et al.
HUMAN MOLECULAR GENETICS (2007)
Autophagy-dependent viral recognition by plasmacytoid dendritic cells
Heung Kyu Lee et al.
SCIENCE (2007)
HSV-1ICP34.5 confers neurovirulence by targeting the Beclin 1 autophagy protein
Anthony Orvedahl et al.
CELL HOST & MICROBE (2007)
Programmed cell death in the larval salivary glands of Apis mellifera (Hymenoptera, Apidae)
E. C. M. Silva-Zacarin et al.
JOURNAL OF BIOSCIENCES (2007)
A peroxisomal lon protease and peroxisome degradation by autophagy play key roles in vitality of Hansenula polymorpha cells
Eda Bener Aksam et al.
AUTOPHAGY (2007)
Trehalose, a novel mTOR-independent autophagy enhancer, accelerates the clearance of mutant huntingtin and α-synuclein
Sovan Sarkar et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Aup1p, a yeast mitochondrial protein phosphatase homolog, is required for efficient stationary phase mitophagy and cell survival
Ruth Tal et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Protective role of autophagy against Vibrio cholerae cytolysin, a pore-forming toxin from V-cholerae
Maximiliano Gabriel Gutierrez et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
ER stress (PERK/eIF2α phosphorylation) mediates the polyglutamine-induced LC3 conversion, an essential step for autophagy formation
Y. Kouroku et al.
CELL DEATH AND DIFFERENTIATION (2007)
Control of macroautophagy by calcium, calmodulin-dependent kinase kinase-β, and Bcl-2
Maria Hoyer-Hansen et al.
MOLECULAR CELL (2007)
A critical role for the autophagy gene Atg5 in T cell survival and proliferation
Heather H. Pua et al.
JOURNAL OF EXPERIMENTAL MEDICINE (2007)
Dual roles of autophagy in the survival of Caenorhabditis elegans during starvation
Chanhee Kang et al.
GENES & DEVELOPMENT (2007)
Regulation of autophagy by extracellular signal-regulated protein kinases during 1-methyl-4-phenylpyridinium-induced cell death
Jian-hui Zhu et al.
AMERICAN JOURNAL OF PATHOLOGY (2007)
Using Ciona to study developmental programmed cell death
Stephen Baghdiguian et al.
SEMINARS IN CANCER BIOLOGY (2007)
Radiation-induced EGFR-signaling and control of DNA-damage repair
H. Peter Rodemann et al.
INTERNATIONAL JOURNAL OF RADIATION BIOLOGY (2007)
Antigen-loading compartments for major histocompatibility complex class II molecules continuously receive input from autophagosomes
Dorothee Schmid et al.
IMMUNITY (2007)
Response to myocardial ischemia/reperfusion injury involves Bnip3 and autophagy
A. Hamacher-Brady et al.
CELL DEATH AND DIFFERENTIATION (2007)
Potential therapeutic applications of autophagy
David C. Rubinsztein et al.
NATURE REVIEWS DRUG DISCOVERY (2007)
The Dark Side of EGFP: Defective Polyubiquitination
Mathijs Baens et al.
PLOS ONE (2006)
Autophagy counterbalances endoplasmic reticulum expansion during the unfolded protein response
Sebastian Bernales et al.
PLOS BIOLOGY (2006)
AtATG genes, homologs of yeast autophagy genes, are involved in constitutive autophagy in Arabidopsis root tip cells
Yuko Inoue et al.
PLANT AND CELL PHYSIOLOGY (2006)
Microtubules support production of starvation-induced autophagosomes but not their targeting and fusion with lysosomes
Ephraim Fass et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
AMP-activated protein kinase and the regulation of autophagic proteolysis
Daniel Meley et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
NF-κB activation represses tumor necrosis factor-α-induced autophagy
Mojgan Djavaheri-Mergny et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Enhancing macroautophagy protects against ischemia/reperfusion injury in cardiac myocytes
Anne Hamacher-Brady et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Endoplasmic reticulum stress triggers autophagy
Tomohiro Yorimitsu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Calpain-mediated cleavage of Atg5 switches autophagy to apoptosis
Shida Yousefi et al.
NATURE CELL BIOLOGY (2006)
Starvation and ULK1-dependent cycling of mammalian Atg9 between the TGN and endosomes
Andrew R. J. Young et al.
JOURNAL OF CELL SCIENCE (2006)
A role for intercellular antigen transfer in the recognition of EBV-transformed B cell lines by EBV nuclear antigen-specific CD4+ T cells
Graham S. Taylor et al.
JOURNAL OF IMMUNOLOGY (2006)
Structure and function of nucleus-vacuole junctions: outer-nuclear-membrane targeting of Nvj1p and a role in tryptophan uptake
Erik Kvam et al.
JOURNAL OF CELL SCIENCE (2006)
Programmed cell death of the ovarian nurse cells during oogenesis of the silkmoth Bombyx mori
Vicky E. Mpakou et al.
DEVELOPMENT GROWTH & DIFFERENTIATION (2006)
Nanoscale resolution in GFP-based microscopy
Katrin I. Willig et al.
NATURE METHODS (2006)
Generation of a large scale repertoire of Expressed Sequence Tags (ESTs) from normalised rainbow trout cDNA libraries
Marina Govoroun et al.
BMC GENOMICS (2006)
Induction of autophagy in axonal dystrophy and degeneration
Qing Jun Wang et al.
JOURNAL OF NEUROSCIENCE (2006)
Cysteine peptidases CPA and CPB are vital for autophagy and differentiation in Leishmania mexicana
Roderick A. Williams et al.
MOLECULAR MICROBIOLOGY (2006)
Functional analysis of the ATG8 homologue Aoatg8 and role of autophagy in differentiation and germination in Aspergillus oryzae
Takashi Kikuma et al.
EUKARYOTIC CELL (2006)
Hydra, a niche for cell and developmental plasticity
Brigitte Galliot et al.
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2006)
DRAM, a p53-induced modulator of autophagy, is critical for apoptosis
Diane Crighton et al.
CELL (2006)
Effects of RNA interference of Atg4B on the limited proteolysis of LC3 in PC12 cells and expression of Atg4B in various rat tissues
Kentaro Yoshimura et al.
AUTOPHAGY (2006)
Autophagy recognizes intracellular Salmonella enterica serovar typhimurium in damaged Vacuoles
Cheryl L. Birmingham et al.
AUTOPHAGY (2006)
Autophagy in immune defense against Mycobacterium tuberculosis
Isabelle Vergne et al.
AUTOPHAGY (2006)
ALIS are stress-induced protein storage compartments for substrates of the proteasome and autophagy
Jason Szeto et al.
AUTOPHAGY (2006)
Autophagy -: A highway for Porphyromonas gingivalis in endothelial cells
Myriam Belanger et al.
AUTOPHAGY (2006)
Autophagy and self-preservation - A step ahead of cell plasticity?
B Gallllot
AUTOPHAGY (2006)
Mouse infection by Legionella, a model to analyze autophagy
Jean-Francois Dubuisson et al.
AUTOPHAGY (2006)
The two faces of autophagy - Coxiella and mycobacterium
Maria Isabel Colombo et al.
AUTOPHAGY (2006)
Suppression of basal autophagy in neural cells causes neurodegenerative disease in mice
Taichi Hara et al.
NATURE (2006)
Loss of autophagy in the central nervous system causes neurodegeneration in mice
Masaaki Komatsu et al.
NATURE (2006)
Induction of autophagy by second-fermentation yeasts during elaboration of sparkling wines
Eduardo Cebollero et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Generation of cell lines with tetracycline-regulated autophagy and a role for autophagy in controlling cell size
Nao Hosokawa et al.
FEBS LETTERS (2006)
Autophagic stress in neuronal injury and disease
Charleen T. Chu
JOURNAL OF NEUROPATHOLOGY AND EXPERIMENTAL NEUROLOGY (2006)
Autophagic fungal cell death is necessary for infection by the rice blast fungus
C Veneault-Fourrey et al.
SCIENCE (2006)
Consequences of the selective blockage of chaperone-mediated autophagy
AC Massey et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Cellular autophagy machinery is not required for vaccinia virus replication and maturation
Haiyan Zhang et al.
AUTOPHAGY (2006)
Protein aggregates are transported to vacuoles by a macroautophagic mechanism in nutrient-starved plant cells
Kiminori Toyooka et al.
AUTOPHAGY (2006)
p62/SQSTM1 - A missing link between protein aggregates and the autophagy machinery
Geir Bjorkoy et al.
AUTOPHAGY (2006)
Engineering of a monomeric green-to-red photoactivatable fluorescent protein induced by blue light
NG Gurskaya et al.
NATURE BIOTECHNOLOGY (2006)
Regulation of autophagy by sphingosine kinase 1 and its role in cell survival during nutrient starvation
G Lavieu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Fluorescence protease protection of GFP chimeras to reveal protein topology and subcellular localization
H Lorenz et al.
NATURE METHODS (2006)
Silencing of the hydra serine protease inhibitor Kazal1 gene mimics the human SPINK1 pancreatic phenotype
S Chera et al.
JOURNAL OF CELL SCIENCE (2006)
Excess peroxisomes are degraded by autophagic machinery in mammals
J Iwata et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Phosphatidylserine in addition to phosphatidylethanolamine is an in vitro target of the mammalian Atg8 modifiers, LC3, GABARAP, and GATE-16
Y Sou et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Microtubules facilitate autophagosome formation and fusion of autophagosomes with endosomes
R Köchl et al.
TRAFFIC (2006)
In situ detection of starvation-induced autophagy
W Martinet et al.
JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY (2006)
PKR-dependent autophagic degradation of herpes simplex virus type 1
Zsolt Talloczy et al.
AUTOPHAGY (2006)
Tracker dyes to probe mitochondrial autophagy (mitophagy) in rat hepatocytes
Sara Rodriguez-Enriquez et al.
AUTOPHAGY (2006)
Detection of autophagy in tissue by standard immunohistochemistry - Possibilities and limitations
W Martinet et al.
AUTOPHAGY (2006)
Molecular mechanisms and regulation of specific and nonspecific autophagy pathways in yeast
U Nair et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
HDAC6 and microtubules are required for autophagic degradation of aggregated Huntingtin
A Iwata et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
The actin cytoskeleton is required for selective types of autophagy, but not nonspecific autophagy, in the yeast Saccharomyces cerevisiae
F Reggiori et al.
MOLECULAR BIOLOGY OF THE CELL (2005)
Participation of autophagy in storage of lysosomes in neurons from mouse models of neuronal ceroid-lipofuscinoses (Batten disease)
M Koike et al.
AMERICAN JOURNAL OF PATHOLOGY (2005)
p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death
G Bjorkoy et al.
JOURNAL OF CELL BIOLOGY (2005)
Ovarian regression and apoptosis in the South American teleost Leporinus taeniatus Lutken (Characiformes, Anostomidae) from the Sao Francisco Basin
HB Santos et al.
JOURNAL OF FISH BIOLOGY (2005)
Accelerated cell death in Podospora autophagy mutants
B Pinan-Lucarré et al.
EUKARYOTIC CELL (2005)
Counting cytokinesis proteins globally and locally in fission yeast
JQ Wu et al.
SCIENCE (2005)
Dendritic cells, DRiPs, and DALIS in the control of antigen processing
P Pierre
IMMUNOLOGICAL REVIEWS (2005)
Vitamin D analog EB1089 triggers dramatic lysosomal changes and Beclin 1-mediated autophagic cell death
M Hoyer-Hansen et al.
CELL DEATH AND DIFFERENTIATION (2005)
Effects of small molecules on chaperone-mediated autophagy
Patrick E. Finn et al.
AUTOPHAGY (2005)
Modifications in P62 occur due to proteasome inhibition in alcoholic liver disease
F Bardag-Gorce et al.
LIFE SCIENCES (2005)
Lithium induces autophagy by inhibiting inositol monophosphatase
S Sarkar et al.
JOURNAL OF CELL BIOLOGY (2005)
Bcl-2 antiapoptotic proteins inhibit Beclin 1-dependent autophagy
S Pattingre et al.
CELL (2005)
Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathways
AR Thompson et al.
PLANT PHYSIOLOGY (2005)
The apoptosis/autophagy paradox:: autophagic vacuolization before apoptotic death
RA González-Polo et al.
JOURNAL OF CELL SCIENCE (2005)
Lysosomal turnover, but not a cellular level, of endogenous LC3 is a marker for autophagy
Isei Tanida et al.
AUTOPHAGY (2005)
Atg9 cycles between mitochondria and the pre-autophagosomal structure in yeasts
Fulvio Reggiori et al.
AUTOPHAGY (2005)
Atg17 regulates the magnitude of the autophagic response
H Cheong et al.
MOLECULAR BIOLOGY OF THE CELL (2005)
Autophagy is an immediate macrophage response to Legionella pneumophila
AO Amer et al.
CELLULAR MICROBIOLOGY (2005)
Essential roles of Atg5 and FADD in autophagic cell death - Dissection of autophagic cell death into vacuole formation and cell death
JO Pyo et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Atg17 functions in cooperation with Atg1 and Atg13 in yeast autophagy
Y Kabeya et al.
MOLECULAR BIOLOGY OF THE CELL (2005)
Atg11 links cargo to the vesicle-forming machinery in the cytoplasm to vacuole targeting pathway
T Yorimitsu et al.
MOLECULAR BIOLOGY OF THE CELL (2005)
Trs85 is required for macroautophagy, pexophagy and cytoplasm to vacuole targeting in Yarrowia apolytica and Saccharomyces rereviesioue
Taras Y. Nazarko et al.
AUTOPHAGY (2005)
The dynamics of autophagy visualized in live cells - From autophagosome formation to fusion with endo/lysosomes
Edward T. W. Bampton et al.
AUTOPHAGY (2005)
Maturation of autophagic vacuoles in mammalian cells
Eeva-Liisa Eskelinen
AUTOPHAGY (2005)
Stimulation of hepatocytic AMP-activated protein kinase by okadaic acid and other autophagy-suppressive toxins
HR Samari et al.
BIOCHEMICAL JOURNAL (2005)
Inhibition of macroautophagy triggers apoptosis
P Boya et al.
MOLECULAR AND CELLULAR BIOLOGY (2005)
Extensive involvement of autophagy in Alzheimer disease: An immuno-electron microscopy study
RA Nixon et al.
JOURNAL OF NEUROPATHOLOGY AND EXPERIMENTAL NEUROLOGY (2005)
Endogenous MHC class II processing of a viral nuclear antigen after autophagy
C Paludan et al.
SCIENCE (2005)
Atg8 is essential for macropexophagy in Hansenula polymorpha
I Monastyrska et al.
TRAFFIC (2005)
Observation of the Yarrowia lipolytica peroxisome-vacuole dynamics by fluorescence microscopy with a single filter set
TY Nazarko et al.
CELL BIOLOGY INTERNATIONAL (2005)
Ceramide-mediated macroautophagy involves inhibition of protein kinase B and up-regulation of beclin 1
F Scarlatti et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Selective photolabeling of proteins using photo activatable GFP
GH Patterson et al.
METHODS (2004)
Role of Unc51.1 and its binding partners in CNS axon outgrowth
T Tomoda et al.
GENES & DEVELOPMENT (2004)
Development and application of a salmonid EST database and cDNA microarray: Data mining and interspecific hybridization characteristics
ML Rise et al.
GENOME RESEARCH (2004)
In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker
N Mizushima et al.
MOLECULAR BIOLOGY OF THE CELL (2004)
In vivo analysis reveals different apoptotic pathways in pre- and postmigratory cerebellar granule cells of rabbit
L Lossi et al.
JOURNAL OF NEUROBIOLOGY (2004)
Impaired degradation of mutant α-synuclein by chaperone-mediated autophagy
AM Cuervo et al.
SCIENCE (2004)
Atg21 is a phosphoinositide binding protein required for efficient lipidation and localization of Atg8 during uptake of aminopeptidase I by selective autophagy
PE Stromhaug et al.
MOLECULAR BIOLOGY OF THE CELL (2004)
Role and regulation of starvation-induced autophagy in the Drosophila fat body
RC Scott et al.
DEVELOPMENTAL CELL (2004)
Programmed autophagy in the Drosophila fat body is induced by ecdysone through regulation of the PI3K pathway
TE Rusten et al.
DEVELOPMENTAL CELL (2004)
Benzoic acid, a weak organic acid food preservative, exerts specific effects on intracellular membrane trafficking pathways in Saccharomyces cerevisiae
R Hazan et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Glucagon represses signaling through the mammalian target of rapamycin in rat liver by activating AMP-activated protein kinase
SR Kimball et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
The role of autophagy during the early neonatal starvation period
A Kuma et al.
NATURE (2004)
Autophagy is a defense mechanism inhibiting BCG and Mycobacterium tuberculosis survival in infected macrophages
MG Gutierrez et al.
CELL (2004)
WIPI-1α (WIPI49), a member of the novel 7-bladed WIPI protein family, is aberrantly expressed in human cancer and is linked to starvation-induced autophagy
T Proikas-Cezanne et al.
ONCOGENE (2004)
Cargo proteins facilitate the formation of transport vesicles in the cytoplasm to vacuole targeting pathway
T Shintani et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp red fluorescent protein
NC Shaner et al.
NATURE BIOTECHNOLOGY (2004)
The V-ATPase inhibitors concanamycin A and bafilomycin A lead to Golgi swelling in tobacco BY-2 cells
DG Robinson et al.
PROTOPLASMA (2004)
Methods for monitoring autophagy
N Mizushima
INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2004)
The Atg1-Atg13 complex regulates Atg9 and Atg23 retrieval transport from the pre-autophagosomal structure
F Reggiori et al.
DEVELOPMENTAL CELL (2004)
Degradation of the gluconeogenic enzymes fructose-1,6-bisphosphatase and malate dehydrogenase is mediated by distinct proteolytic pathways and signaling events
GC Hung et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Transcriptional activation of p62/A170/ZIP during the formation of the aggregates: possible mechanisms and the role in Lewy body formation in Parkinson's disease
K Nakaso et al.
BRAIN RESEARCH (2004)
Human hibernating myocardium is jeopardized by apoptotic and autophagic cell death
A Elsässer et al.
JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY (2004)
Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy
K Yoshimoto et al.
PLANT CELL (2004)
Multiple types of skeletal muscle atrophy involve a common program of changes in gene expression
SH Lecker et al.
FASEB JOURNAL (2004)
LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation
Y Kabeya et al.
JOURNAL OF CELL SCIENCE (2004)
Rab7 is required for the normal progression of the autophagic pathway in mammalian cells
MG Gutierrez et al.
JOURNAL OF CELL SCIENCE (2004)
The effect of phosphoinositide 3-kinase inhibitors on programmed nuclear degradation in Tetrahymena and fate of surviving nuclei
JS Yakisich et al.
CELL DEATH AND DIFFERENTIATION (2004)
Involvement of integrins and Src in insulin signaling toward autophagic proteolysis in rat liver
F Schliess et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
The p75 neurotrophin receptor can induce autophagy and death of cerebellar Purkinje neurons
ML Florez-McClure et al.
JOURNAL OF NEUROSCIENCE (2004)
TSC2 mediates cellular energy response to control cell growth and survival
K Inoki et al.
CELL (2003)
Alternative programs of cell death in developing retinal tissue
CA Guimaraes et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Autophagy genes are essential for dauer development and life-span extension in C-elegans
A Meléndez et al.
SCIENCE (2003)
Alpha tonoplast intrinsic protein is specifically associated with vacuole membrane involved in an autophagic process
Y Moriyasu et al.
PLANT AND CELL PHYSIOLOGY (2003)
Post-translational modifications of three members of the human MAP1LC3 family and detection of a novel type of modification for MAP1LC3B
H He et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Cytoplasmic bacteria can be targets for autophagy
KA Rich et al.
CELLULAR MICROBIOLOGY (2003)
Regulation of targets of mTOR (mammalian target of rapamycin) signalling by intracellular amino acid availability
A Beugnet et al.
BIOCHEMICAL JOURNAL (2003)
Macroautophagy is required for multicellular development of the social amoeba Dictyostelium discoideum
GP Otto et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Major histocompatibility complex class II-restricted presentation of a cytosolic antigen by autophagy
F Nimmerjahn et al.
EUROPEAN JOURNAL OF IMMUNOLOGY (2003)
Mouse Apg16L, a novel WD-repeat protein, targets to the autophagic isolation membrane with the Apg12-Apg5 conjugate
N Mizushima et al.
JOURNAL OF CELL SCIENCE (2003)
Myocytes die by multiple mechanisms in failing human hearts
S Kostin et al.
CIRCULATION RESEARCH (2003)
Catabolite degradation of fructose-1,6-bisphosphatase in the yeast Saccharomyces cerevisiae:: A genome-wide screen identifies eight novel GID genes and indicates the existence of two degradation pathways
J Regelmann et al.
MOLECULAR BIOLOGY OF THE CELL (2003)
A SAGE approach to discovery of genes involved in autophagic cell death
SM Gorski et al.
CURRENT BIOLOGY (2003)
Genome-wide analyses of steroid- and radiation- triggered programmed cell death in Drosophila
CY Lee et al.
CURRENT BIOLOGY (2003)
The chicken as a model for large-scale analysis of vertebrate gene function
WRA Brown et al.
NATURE REVIEWS GENETICS (2003)
Piecemeal microautophagy of nucleus in Saccharomyces cerevisiae
P Roberts et al.
MOLECULAR BIOLOGY OF THE CELL (2003)
Autophagy is induced during cell death by incompatibility and is essential for differentiation in the filamentous fungus Podospora anserina
R Pinan-Lucarre et al.
MOLECULAR MICROBIOLOGY (2003)
Genome-wide monitoring of wine yeast gene expression during alcoholic fermentation
T Rossignol et al.
YEAST (2003)
Sequence analysis of a rainbow trout cDNA library and creation of a gene index
CE Rexroad et al.
CYTOGENETIC AND GENOME RESEARCH (2003)
Crystal structure of Venus, a yellow fluorescent protein with improved maturation and reduced environmental sensitivity
A Rekas et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Status and opportunities for genomics research with rainbow trout
GH Thorgaard et al.
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY (2002)
Mechanism of cargo selection in the cytoplasm to vacuole targeting pathway
T Shintani et al.
DEVELOPMENTAL CELL (2002)
Domain-specific mutations in sequestosome 1 (SQSTM1) cause familial and sporadic Paget's disease
LJ Hocking et al.
HUMAN MOLECULAR GENETICS (2002)
The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana
JH Doelling et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Cellular autophagic capacity changes during azaserine-induced tumour progression in the rat pancreas -: Up-regulation in all premalignant stages and down-regulation with loss of cycloheximide sensitivity of segregation along with malignant transformation
S Tóth et al.
CELL AND TISSUE RESEARCH (2002)
A novel protein complex linking the δ2 glutamate receptor and autophagy:: Implications for neurodegeneration in Lurcher mice
ZY Yue et al.
NEURON (2002)
Phagocytosis of apoptotic cells by liver:: A morphological study
L Dini et al.
MICROSCOPY RESEARCH AND TECHNIQUE (2002)
SKD1 AAA ATPase-dependent endosomal transport is involved in autolysosome formation
A Nara et al.
CELL STRUCTURE AND FUNCTION (2002)
Relative labelling index a novel stereological approach to test for non-random immunogold labelling of organelles and membranes on transmission electron microscopy thin sections
TM Mayhew et al.
JOURNAL OF MICROSCOPY (2002)
Convergence of multiple autophagy and cytoplasm to vacuole targeting components to a perivacuolar membrane compartment prior to de novo vesicle formation
J Kim et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Paz2 and 13 other PAZ gene products regulate vacuolar engulfment of peroxisomes during micropexophagy
H Mukaiyama et al.
GENES TO CELLS (2002)
Cvt18/Gsa12 is required for cytoplasm-to-vacuole transport, pexophagy, and autophagy in Saccharomyces cerevisiae and Pichia pastoris
J Guan et al.
MOLECULAR BIOLOGY OF THE CELL (2001)
Autophagy and the cytoplasm to vacuole targeting pathway both require Aut10p
H Barth et al.
FEBS LETTERS (2001)
The pre-autophagosomal structure organized by concerted functions of APG genes is essential for autophagosome formation
K Suzuki et al.
EMBO JOURNAL (2001)
Role of AMP-activated protein kinase in mechanism of metformin action
GC Zhou et al.
JOURNAL OF CLINICAL INVESTIGATION (2001)
The relationship between lumenal and limiting membranes in swollen late endocytic compartments formed after wortmannin treatment or sucrose accumulation
NA Bright et al.
TRAFFIC (2001)
Autophagic cell death and its execution by lysosomal cathepsins
Y Uchiyama
ARCHIVES OF HISTOLOGY AND CYTOLOGY (2001)
Apoptotic versus autophagic cell death in heart failure
MWM Knaapen et al.
CARDIOVASCULAR RESEARCH (2001)
Cloning, expression patterns, and chromosome localization of three human and two mouse homologues of GABAA receptor-associated protein
YR Xin et al.
GENOMICS (2001)
Beclin-phosphatidylinositol 3-kinase complex functions at the trans-Golgi network
A Kihara et al.
EMBO REPORTS (2001)
Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells
N Mizushima et al.
JOURNAL OF CELL BIOLOGY (2001)
Cell hydration controls autophagosome formation in rat liver in a microtubule-dependent way downstream from p38MAPK activation
S vom Dahl et al.
BIOCHEMICAL JOURNAL (2001)
Two distinct Vps34 phosphatidylinositol 3-kinase complexes function in autophagy and carboxypeptidase Y sorting in Saccharomyces cerevisiae
A Kihara et al.
JOURNAL OF CELL BIOLOGY (2001)
Fluorescence properties and staining behavior of monodansylpentane, a structural homologue of the lysosomotropic agent monodansylcadaverine
A Niemann et al.
JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY (2001)
Leupeptin-induced appearance of partial fragment of betaine homocysteine methyltransferase during autophagic maturation in rat hepatocytes
N Furuya et al.
JOURNAL OF BIOCHEMISTRY (2001)
Membrane recruitment of Aut7p in the autophagy and cytoplasm to vacuole targeting pathways requires Aut1p, Aut2p, and the autophagy conjugation complex
J Kim et al.
JOURNAL OF CELL BIOLOGY (2001)
Interaction of the Unc-51-like kinase and microtubule-associated protein light chain 3 related proteins in the brain: possible role of vesicular transport in axonal elongation
N Okazaki et al.
MOLECULAR BRAIN RESEARCH (2000)
Ultrastructural characterization of the delimiting membranes of isolated autophagosomes and amphisomes by freeze-fracture electron microscopy
M Fengsrud et al.
EUROPEAN JOURNAL OF CELL BIOLOGY (2000)
Autophagy in the epithelial cells of murine seminal vesicle in vitro -: Formation of large sheets of nascent isolation membranes, sequestration of the nucleus and inhibition by wortmannin and 3-methyladenine
AL Kovács et al.
CELL AND TISSUE RESEARCH (2000)
LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing
Y Kabeya et al.
EMBO JOURNAL (2000)
The reversible modification regulates the membrane-binding state of Apg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway
T Kirisako et al.
JOURNAL OF CELL BIOLOGY (2000)
Tor-mediated induction of autophagy via an Apg1 protein kinase complex
Y Kamada et al.
JOURNAL OF CELL BIOLOGY (2000)
Apg13p and Vac8p are part of a complex of phosphoproteins that are required for cytoplasm to vacuole targeting
SV Scott et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
Chloroquine interferes with lipopolysaccharide-induced TNF-α gene expression by a nonlysosomotropic mechanism
SM Weber et al.
JOURNAL OF IMMUNOLOGY (2000)
Ubc8p functions in catabolite degradation of fructose-1,6-bisphosphatase in yeast
T Schüle et al.
EMBO JOURNAL (2000)
The itinerary of a vesicle component, Aut7p/Cvt5p, terminates in the yeast vacuole via the autophagy/Cvt pathways
WP Huang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
Distinct classes of phosphatidylinositol 3′-kinases are involved in signaling pathways that control macroautophagy in HT-29 cells
A Petiot et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
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