Journal
SYSTEMATIC BIOLOGY
Volume 51, Issue 5, Pages 673-688Publisher
OXFORD UNIV PRESS
DOI: 10.1080/10635150290102366
Keywords
Bayesian inference; Markov chain Monte Carlo; phylogeny; posterior probability
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Only recently has Bayesian inference of phylogeny been proposed. The method is now a practical alternative to the other methods; indeed, the method appears to possess advantages over the other methods in terms of ability to use complex models of evolution, ease of interpretation of the results, and computational efficiency. However, the method should be used cautiously. The results of a Bayesian analysis should be examined with respect to the sensitivity of the results to the priors used and the reliability of the Markov chain Monte Carlo approximation of the probabilities of trees.
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