Journal
BIOINFORMATICS
Volume 18, Issue 11, Pages 1546-1547Publisher
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/18.11.1546
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We have written a fast implementation of the popular Neighbor-Joining tree building algorithm. QuickTree allows the reconstruction of phylogenies for very large protein families (including the largest Pfam alignment containing 27000 HIV GP120 glycoprotein sequences) that would be infeasible using other popular methods.
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