4.7 Article

Binless strategies for estimation of information from neural data

Journal

PHYSICAL REVIEW E
Volume 66, Issue 5, Pages -

Publisher

AMER PHYSICAL SOC
DOI: 10.1103/PhysRevE.66.051903

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Funding

  1. NEI NIH HHS [EY9314] Funding Source: Medline

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We present an approach to estimate information carried by experimentally observed neural spike trains elicited by known stimuli. This approach makes use of an embedding of the observed spike trains into a set of vector spaces, and entropy estimates based on the nearest-neighbor Euclidean distances within these vector spaces [L. F. Kozachenko and N. N. Leonenko, Probl. Peredachi Inf. 23, 9 (1987)]. Using numerical examples, we show that this approach can be dramatically more efficient than standard bin-based approaches such as the direct method [S. P. Strong, R. Koberle, R. R. de Ruyter van Steveninck, and W. Bialek, Phys. Rev. Lett. 80, 197 (1998)] for amounts of data typically available from laboratory experiments.

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