4.8 Article

SIRW: a web server for the Simple Indexing and Retrieval System that combines sequence motif searches with keyword searches

Journal

NUCLEIC ACIDS RESEARCH
Volume 31, Issue 13, Pages 3771-3774

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkg546

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SIRW (http://sirw.embl.de/) is a World Wide Web interface to the Simple Indexing and Retrieval System (SIR) that is capable of parsing and indexing various flat file databases. In addition it provides a framework for doing sequence analysis (e.g. motif pattern searches) for selected biological sequences through keyword search. SIRW is an ideal tool for the bioinformatics community for searching as well as analyzing biological sequences of interest.

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