4.4 Article

An algorithm to delineate and integrate topological basins in a three-dimensional quantum mechanical density function

Journal

JOURNAL OF COMPUTATIONAL CHEMISTRY
Volume 24, Issue 10, Pages 1276-1282

Publisher

WILEY-BLACKWELL
DOI: 10.1002/jcc.10250

Keywords

Quantum Chemical Topology; basin integration; Laplacian of the electron density; algorithm

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The growing activity in the area of Quantum Chemical Topology warrants a new algorithm to delineate topological basins in 3D scalar fields other than the electron density. A method based on the octal tree search algorithm of computer graphics is proposed to reach this goal. We illustrate the algorithm on the L(r) function, which is the negative of the Laplacian of the electron density. Because of its complicated topology, even in a simple test molecule such as water, it benefits from the octal tree algorithm as a robust, compact, and general technique to find the boundaries of topological basins. For the first time, we are able to compute the population and volume of the core and valence (bonding and nonbonding, i.e., lone pair) basins given by L(r)'s topology. (C) 2003 Wiley Periodicals, Inc.

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