4.7 Article

FindGDPs: identification of primers for labeling microbial transcriptomes for DNA microarray analysis

Journal

BIOINFORMATICS
Volume 19, Issue 13, Pages 1718-1719

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btg218

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Funding

  1. NIAID NIH HHS [R01 AI036344, R56 AI032011, AI36344, R01 AI036344-08, R01 AI032011-11, R01 AI032011, R37 AI032011, AI32011, AI17621] Funding Source: Medline

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FindGDPs is a program that uses a greedy algorithm to quickly identify a set of genome-directed primers that specifically anneal to all of the open reading frames in a genome and that do not exhibit full-length complementarity to the members of another user-supplied set of nucleotide sequences.

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