Journal
BIOCHEMISTRY
Volume 42, Issue 39, Pages 11466-11475Publisher
AMER CHEMICAL SOC
DOI: 10.1021/bi0300884
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Funding
- NIGMS NIH HHS [F32-GM19843, GM25765] Funding Source: Medline
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The reactivity of O-2 with soybean lipoxygenase-1 (SLO) has been examined using a range of kinetic probes. We are able to rule out diffusional encounter of O-2 with protein, an outer-sphere electron transfer to O-2, and proton transfer as rate-limiting steps in k(cat)/K-M(O-2) for wild-type enzyme (WT SLO); this restricts the rate-limiting step to either the combination of O-2 with L-. or a subsequent conformational change. In the Ile(553) --> Phe mutant, which constricts the putative O-2 binding channel [Knapp et al. (2001) J. Am. Chem. Soc. 123, 2931-2932], k(cat)/K-M(O-2) decreases by over a factor of 20; yet, this mutant appears to have the same rate-limiting step as WT SLO. It is argued that the slow step on k(cat)/K-M(O-2) is the combination of O-2 with L-., with proximal protein effects determining the rate of reaction. The available data for SLO support the view that enzymes can affect O-2 reactivity without a direct involvement of metal cofactors. The primary role of the Fe3+ cofactor is to generate an enzyme-bound radical, while the protein is concluded to control the stereo- and regiochemistry of O-2 encounter with this radical.
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